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Detailed information on CNT30305252


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-145

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674319Triticum aestivumSetaria viridis8774.5290.71743forward
CNT30528288Triticum aestivumEucalyptus grandis89.1156.7987.12761forward
CNT3044330Triticum aestivumPrunus dulcis86.360.2686.3737forward
CNT30191758Triticum aestivumSecale cereale99.355.6891.75848forward
CNT30226205Triticum aestivumHordeum vulgare97.6680.8190.77834forward
CNT30242826Triticum aestivumAvena sativa91.4562.4891.42781forward
CNT30461176Triticum aestivumSaccharum spontaneum90.8722.7687.24776forward
CNT30141342Triticum aestivumLolium perenne99.5365.7490.71850forward
CNT307928Triticum aestivumZea mays85.7161.4187.98732forward
CNT30229013Triticum aestivumAnanas comosus99.8854.0985.11853forward
CNT30652285Triticum aestivumRosa chinensis87.5961.4685.83748forward
CNT30716337Triticum aestivumMalus domestica golden99.1868.3686.54847forward
CNT30348745Triticum aestivumEragrostis tef99.6576.685.55851forward
CNT30583334Triticum aestivumEchinochloa crusgalli80.0931.8190.2684forward
CNT30116770Triticum aestivumOryza nivara99.5360.885.06850forward
CNT30593897Triticum aestivumEragrostis curvula86.5365.8190.12739forward
CNT30174646Triticum aestivumVigna angularis85.0169.6786.36726forward

Expression of CNT30305252

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVSVLTKICMPPRSLSTRWRVDSFWML*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVFTNICMPPRSLSTKWRVDSFWML*

>peptide 3 (40 aa)
MVSDDSTSRVMVLPVRVFTKICMPPRSLSTRWRVDSFWML*

>peptide 4 (41 aa)
LSMVSEDSTSKVMVLPVSVLTKICMPPRSLSTRWRVDSWML*

>peptide 5 (30 aa)
IVNGVRGLDLQGDGLACQCLDENLHATTEP*

Sequence

>CNT30305252
CATTGTCAATGGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCTGTCAGTGTCTTGACGAAAATCTGCATGCCACCACGGAGCCTTAGCACGAG
GTGGAGGGTGGACTCCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGCATGCCC
TCCTTGTCCTGGATCTTTGCCTTGACGTTGTCTATGGTGTCAGAGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGTGTCTTGACAAAAATCTGCA
TGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGAT
GAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTAGACGTTGTCAATGGTGTCAGATGACTCGACCTCAAGGGTGATGGTCTTG
CCGGTGAGGGTCTTCACGAAGATTTGCATGCCACCCCGGAGCTTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGC
CATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGA
TGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCATGCCACCACGGAGCCTGAGCACCAAGTGGAGGGTGGACTCCTTC
TGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG