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Detailed information on CNT30304990


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SDM1|CB121_HORVU, E-value = 2e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673697Triticum aestivumSetaria viridis33.4719.8690.4884forward
CNT30567058Triticum aestivumActinidia chinensis24.316.9488.5261forward
CNT30589124Triticum aestivumMusa acuminata59.7649.3487.33150forward
CNT30254921Triticum aestivumAvena sativa92.4397.0794.83232forward
CNT30669889Triticum aestivumTriticum dicoccoides98.4197.2497.98247forward
CNT307903Triticum aestivumZea mays43.4328.3990.83109forward
CNT30148497Triticum aestivumBrachypodium distachyon25.521.9995.3164forward
CNT30102128Triticum aestivumOryza rufipogon63.3527.4688.68159forward
CNT30576871Triticum aestivumOryza barthii66.1419.389.16166forward
CNT30580015Triticum aestivumEchinochloa crusgalli86.8539.1491.28218forward
CNT30497042Triticum aestivumDigitaria exilis48.6115.3590.16122forward
CNT30551236Triticum aestivumOryza brachyantha59.7615.0893.33150forward

Expression of CNT30304990

Peptides detected in this lncRNA

>peptide 1 (82 aa)
TVLDLLELELLELGGVLGEAERVEGDGQELDRQDGRQVAPRHRVAQVRRLPVGERRPLLRLHPVAQSQRLRHQHPRLHVVHAT

>peptide 2 (82 aa)
PFLISLSLSSSNLAGSLEKPSGSKAMARNSIARMVGRLPHGTGLPRYVACPSGSAAHSCAFTQLPSPSASGTSTPGCTSSMPQ

Sequence

>CNT30304990
ACCGTTCTTGATCTCCTTGAGCTTGAGCTCCTCGAACTTGGCGGGGTCCTTGGAGAAGCCGAGCGGGTCGAAGGCGATGGCCAGGAACTCGATCGCCAGG
ATGGTCGGCAGGTTGCCCCACGGCACCGGGTTGCCCAGGTACGTCGCCTGCCCGTCGGGGAGCGCCGCCCACTCCTGCGCCTTCACCCAGTTGCCCAGTC
CCAGCGCCTCCGGCACCAGCACCCCAGGCTGCACGTCGTCCATGCCACAAC