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Detailed information on CNT30304781


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30669215Triticum aestivumTriticum dicoccoides71.3343.5199.051050forward
CNT30362772Triticum aestivumSorghum bicolor4.9631.7486.373reverse complement

Expression of CNT30304781

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MASKAVAALLVTDELALPLRAVGDGSGEARSCAATA*

>peptide 2 (33 aa)
MVTLVLTSPGRGACDLTVLGWCLVAGQGGELTV*

>peptide 3 (90 aa)
MALRDSSVRSSGWGYAVTPGRRCPIPARRLPRANHGGLDQGGVRAARRPVVSVGAGEFGSVRRDGGEPARRPMIGPWSRAKRRGSTPNPG*

>peptide 4 (39 aa)
KPHSLSLAHVPHLTPLSLLSLSLGNPSAPLLPCRRHLRR*

>peptide 5 (47 aa)
MNSMSLRVLFELIDATELIWRATYSFGCNIMLALLKSIMMHQMLFTSC

Sequence

>CNT30304781
CAAACCCCACTCTCTCTCTCTCGCGCACGTACCCCACCTAACCCCTCTTTCCCTCCTCTCTCTCTCTCTCGGGAACCCTAGCGCTCCACTCCTCCCTTGC
CGCCGCCACCTCCGGCGGTAATCGAAGACCATATCCGGTGAGATCTGGCGCGCGCAGCGAGATCCATCTCTCTCTCACACACGAGAAGGAAAATCCCCCG
CCCCATTCCCACGACTCATCTGCCTCTCCCTCGATCCCCTTCCTTCCCGAGGACGCACGCGCCGCCGCCTCCCCGATCCCCTTCTCCCCTCGCCACCCCA
CATCACCCCGCCATCCACCTCGTCGCCTCCCTGATTCATCCTCCTCCTCCTCCTATTCCCCTCATCAGATCCATCCATCCATTCATTTTTCCATCAGATC
CACCTGACGCCATCGCATCCCCTTCTCGCTCGCAGGGTTGCAGGCGATTCAATCTGGTCCGGGTCCATGGCGTCCAAGGCCGTGGCGGCGCTACTGGTGA
CGGACGAGCTGGCCCTGCCGCTCCGTGCGGTGGGGGACGGCAGCGGGGAAGCACGCAGCTGCGCAGCGACCGCGTGAGGTTTCAGTGAGCGGCCGCATTG
CTACGGCAGGAGGACCAACGCGCGCTTCCGGCGACGAGGCTCCATCGCGCGAACCAAGACACGGACTCGACAGGATGGCTCTGCGGGACTCCAGTGTCAG
AAGCAGCGGTTGGGGCTACGCGGTGACCCCAGGACGCCGCTGCCCGATTCCGGCGCGAAGGCTACCTCGCGCAAATCATGGCGGCCTTGACCAAGGAGGG
GTCCGTGCCGCGCGGCGACCGGTGGTGAGCGTCGGTGCTGGCGAGTTTGGGTCAGTACGTCGCGACGGCGGCGAGCCTGCTCGGCGGCCCATGATTGGAC
CTTGGAGCCGCGCGAAGAGAAGGGGATCCACTCCAAACCCAGGATAGGCAACATGGTGACTCTAGTGCTGACATCTCCCGGTCGCGGCGCGTGTGATCTG
ACTGTGTTGGGTTGGTGTCTAGTTGCAGGACAAGGTGGCGAACTCACTGTTTGAGAAGACGTCGAACCAGTTAGGCATCGGCTGCGCGCTACCGCCCAAG
AAGGACCTCCACCTGTTCGCCAGCGCCGCATACTCAAGCAGCGCATCCGTGCCCAGCCGCGGTTGTTTTTGCCCATTTATGTTGTTGCTTTAGTAGCATT
CTTTCCTTTCTTTTATGTAGCAGCAGAGCACCACTCTTACTATGCACTTCGCTCCAGATTCTGCTACAATTACAAATTTAAAATGCATTCATGCATGAGC
AGTGCATGTGTTGGCTGTCCATGAGATCATGAATAGTATGAGCCTTAGAGTCTTGTTCGAACTCATTGATGCAACAGAACTCATTTGGAGAGCTACCTAC
TCATTTGGATGTAATATCATGCTTGCTCTTTTGAAATCGATAATGATGCATCAAATGCTATTCACAAGTTGC