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Detailed information on CNT30304558


BLAST search results

BLAST vs Swiss-Prot:
sp|P06528|ATPF_WHEAT, E-value = 8e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632292Triticum aestivumVigna unguiculata20.65485.83120forward

Expression of CNT30304558

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PLLVRLSVIESELFRVAQWSLYTILLNFE*

Sequence

>CNT30304558
CCGCTTCTAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTACACAATTCTTCTGAATTTTGAATAGTACTCAAGAT
CCTCTGTTTTCGATTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAAATCAAAACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAA
ATATCGGTATTAGGCCCGAAACTGCCAGCGGATGGCCAGTGAGCTAGAAAAACGAAAGAATGGGTTACATTTTTCATATGCTCTCCTCTTATAGATAGGA
CAAACAAAGAACAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGATTTTTTAATGCAAATAGATTCAATCTAGTAATTTCTTTTAGATTA
AGTCTTACGTCTTGTTTGACTGGTGAAATACTTCCTTTGTTGAAATGTTCTGTTCCCAAAATTCCTAAAATAAAAGGAAAAAAACTTTCCACTTTCCTAA
ACTAAGGACGGGAAATAAGAAGGTGAGCATATCTTCTAAATTAATAATACTCAACTCAGCCCTTCCTAGAATGGGGTATTA