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Detailed information on CNT30304298


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Triticum aestivumOryza sativa45.238.1799.161196forward
CNT30548882Triticum aestivumIpomoea triloba37.4937.6398.29992reverse complement
CNT30632593Triticum aestivumVigna unguiculata37.7259.1297.29998reverse complement
CNT30158473Triticum aestivumPistacia vera2.2727.5210060reverse complement
CNT30637323Triticum aestivumCapsicum annuum17.8833.591.12473reverse complement
CNT3098505Triticum aestivumSolanum tuberosum18.2949.3494.21484forward
CNT30400948Triticum aestivumTriticum turgidum91.6196.9699.422424forward
CNT30569653Triticum aestivumActinidia chinensis11.9447.0996.84316forward
CNT30585815Triticum aestivumMusa acuminata37.9141.3395.611003reverse complement
CNT30147394Triticum aestivumMedicago truncatula37.645097.89996reverse complement
CNT30435015Triticum aestivumAegilops tauschii42.5910099.111127forward
CNT30662061Triticum aestivumTriticum dicoccoides72.5210099.371919forward
CNT3081478Triticum aestivumBrassica juncea28.0864.1694.75743reverse complement
CNT30263293Triticum aestivumBrassica rapa6.2439.4787.27165forward
CNT30139202Triticum aestivumLolium perenne80.5783.5197.142132forward
CNT3016633Triticum aestivumZea mays71.9299.5896.271903forward
CNT30229838Triticum aestivumAnanas comosus16.7410098.19443forward
CNT30218527Triticum aestivumKalanchoe fedtschenkoi28.3150.398.66749forward
CNT3067373Triticum aestivumLeersia perrieri10.5892.7299.64280reverse complement
CNT30655299Triticum aestivumRosa chinensis37.4534.9298.28991reverse complement
CNT30203595Triticum aestivumHelianthus annuus37.9154.7596.411003reverse complement
CNT30689128Triticum aestivumTriticum urartu56.9281.0198.871506reverse complement
CNT30721611Triticum aestivumTriticum spelta9.0351.8499.58239forward
CNT30366518Triticum aestivumSorghum bicolor11.7996.393.27312forward
CNT30595506Triticum aestivumOryza meridionalis13.0431.36100345forward
CNT30369805Triticum aestivumOryza glumipatula36.4367.2296.99964reverse complement
CNT30420891Triticum aestivumPapaver somniferum22.321.9792.37590forward
CNT30323793Triticum aestivumAsparagus officinalis7.8265.5197.58207reverse complement
CNT30151602Triticum aestivumBrachypodium distachyon13.9873.8594.86370forward
CNT30104648Triticum aestivumOryza rufipogon17.6980.2798.5468forward
CNT30575706Triticum aestivumOryza barthii36.3239.4397.09961reverse complement
CNT30582488Triticum aestivumEchinochloa crusgalli45.1298.3599.51194reverse complement
CNT30495774Triticum aestivumDigitaria exilis14.8599.2499.49393forward
CNT30116696Triticum aestivumOryza nivara45.230.1699.251196forward

Expression of CNT30304298

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MLHRLCRPPSIPLSFGLATVLPRRSVSRVSWAPDPRRPRANTHRLRHGLPGYLILFAPHAFAPQRR*

>peptide 2 (44 aa)
MVKFLLKAQLRAGTQSSSSAGTSLGGNFSLGACLSNTKRGFRSL*

>peptide 3 (41 aa)
VESNHSKDLESFYQPVRTNISLLYSVFSLSASTIWISSPMR*

>peptide 4 (37 aa)
MGDHWSDASGETNSQGVTGGVYRARVHIHRGMLICDY*

>peptide 5 (37 aa)
MIRRGQDSNLQSSGHEPDELTNSSTPLLPLIFLSLFP*

>peptide 6 (87 aa)
MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPIHRLRALYAQSFRRTLAPPVLPRLLARS*

>peptide 7 (50 aa)
MIAHSTKELYKRYCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

>peptide 8 (45 aa)
MPSLPPPPTRRRRNQFQPNLHAHWYFDVTIGRSPWVLGKTTSVHT*

>peptide 9 (31 aa)
MSPEQFQYIWRKTIPHIYRGRNGIGCFHVSP*

>peptide 10 (31 aa)
MFPSCKEQSELRQSFRIRSALQPCFPLSLPL*

>peptide 11 (30 aa)
GIEPLKGFRVLLPTSQNQYFSVIFCFFFVS*

Sequence

>CNT30304298
GTGGAATCGAACCACTCAAAGGATTTAGAGTCCTTTTACCAACCAGTCAGAACCAATATTTCTCTGTTATATTCTGTTTTTTCTTTGTCAGCTAGCACAA
TTTGGATTTCGAGTCCAATGCGCTAACGCTTTCTTTAGTTTTCTTGCTTGATTTTTATACGATTTTTTGAGCAACTAGCGCGAAAGCCGTTGCGCGTTAG
CGCATCCGTTTTCTTGCTCTTTCTCCGGGCTTTGACCATGTCTCCCGAACAATTTCAGTACATATGGCGCAAGACGATTCCACATATATATCGAGGTCGG
AATGGGATCGGGTGTTTTCACGTCTCACCGTAGTGCCCGGTTTGTCTTGATTGGTGATTGATAAACAAGAAGGAAAATGGAAAAGTAGAAAATCTACATG
TTTATACCGTTGAGGTCCTTAGTTTAGTCAAGTAGGCAAGGGCATTTCCATCGCGAAGGATTCAATCCAGCCACAGGTTCCCCTACGGCTACCTTGTTAC
GACTTCACCCCAGTCGAAGACCCCACCGTGGTATGCGCCAATAAGACCACCAAAGGCCTTTGTGGCACTAGTGGTACACAGAAGTCATGGGTGATCATTG
GTCCGATGCTTCGGGCGAAACCAATTCCCAGGGTGTGACGGGCGGTGTGTACAGGGCCCGGGTACATATTCACCGCGGCATGCTGATCTGTGATTACTAG
CGATTTCAACTTCATGTTCCCGAGTTGCAAAGAACAATCCGAACTGAGGCAATCTTTCCGGATTCGCTCCGCCTTACAGCCTTGCTTCCCATTGTCATTG
CCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCACTGGCAGTCCCTCGTGAGTGCG
GCACGCACCTTTTTCTTTGTTTCGGAGCGGGGCGCGTACTATTACCACTACGTTCCACACCATTTTCTGGCCTTCATGCCGAGTCTTCCTCCGCCGCCAA
CTCGACGTCGTCGTAACCAATTTCAACCAAACCTCCATGCTCACTGGTACTTTGACGTCACTATAGGTAGGTCTCCGTGGGTCTTGGGCAAGACGACTTC
GGTTCACACGTGAAAGTGCTTCGAAAGGCACCGGCTCCCAATGGTGAAATTCTTGCTGAAAGCACAGCTACGTGCTGGCACTCAATCAAGTAGTAGCGCT
GGCACGTCACTCGGTGGCAATTTCTCCTTAGGCGCATGTCTCAGCAACACAAAACGAGGGTTTCGCTCGTTATAGGACTTGACCAAACATCTCACGACAC
GAGCTGACGACAGCCATGCAGCACCTGTATGAAAGTCAGTACCATCGTGTTAAGGACAGGTTTTGTTGTTCATATGTCAAGGGCTGGTAAGGTTTTGCGC
GTTGTATCGAATTAAACCACATGCTCCACCGCTTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGGAGTGTTTC
ACGCGTTAGCTGGGCCCCTGATCCGCGTAGACCAAGGGCGAACACTCATCGTTTACGGCATGGACTACCAGGGTATCTAATCCTGTTCGCTCCCCATGCT
TTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTACGGATTTCACCCCTACACACGAAATTCCACTCT
CCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCGCCACTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCC
AGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCG
ACGAAAGAGCTTTACAAGCGGTATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCG
TGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGCAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTA
ATACTACGCAGGCTCATCAAACAACGCTTTTGAGCTTTCTTCAGGATTTGGCCCGAACTGTTCGACAGATTCCCACGCGTTACGCACCCGTTCGCCACTT
TGTTCTCAACTATTCCGATTCCAGCAAACGGAGGCCGTTAGGTCAAAGCCGTAGCGCGCGCCCTGTAGTTTTGAAGCAGGGCGAGACAACTTTAGCTAGG
AGCCTCTTTTCCTTCTGCCCAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTAAGCATATAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCAGAT
TTTGACTATGATTAGGCGGGGACAGGATTCGAACCTGCAGTCTTCAGGTCATGAGCCTGATGAGTTGACCAATTCCTCTACCCCGCTTCTTCCCCTGATC
TTTCTTTCCCTCTTCCCATAAACATTGATTCTCTCTCCTAACCACTCTTAAATATGTGAAATACACGGAATCGATCCAAAACTACAAGCAAGGGAATCAA
CTCTTATTGCCGTAAAGGAAAAATAACCCCTTTCCTTTATATATAT