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Detailed information on CNT30304099


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 4e-92

BLAST vs NONCODE:
NONMTRT002042, E-value = 2e-40

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225892Triticum aestivumHordeum vulgare74.2796.7294.23589forward

Expression of CNT30304099

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSSVMVLPVRVLTKICMPPLRRRTR*

>peptide 2 (39 aa)
MRRCWSGGMPSLSWILALTLSIVSDDSTSRVMVLPVNVFT

Sequence

>CNT30304099
TTCAAAGATAGAAGAAACATGGATATATAACTGGCAAAATCTAATGATTTCACAGGAACATTGAGAGCTACAGCCCATAAAATGCAATCAGAGAGCCACT
AGGGTAATATCACTGCTAGTTGTAAAAACTGGAAGAAACATTCAACCAGCAGATATCAAATCAAAAGTAAAATGAATAAGCATATTGGTTCAAATTGACT
TATTCATACCAAACCATACCAGCAACTGTTTCCACGAAACCAACACACATCATCAGGACTAGATGGTCGATCAAACCAGATACAGTAGACTTAACACGAA
CAAGGCACAGGACTAATAGCAGCAGGTCCAACGTCAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTG
TAGTCAGCAAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCA
CGTTGTCAATGGTGTCGGAGGATTCCACTTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCTCCCCTAAGGCGGAGGACAAG
GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATG
CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCTGTCAATGTCTTCACA