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Detailed information on CNT30303698


BLAST search results

BLAST vs Swiss-Prot:
sp|P12112|ATPA_WHEAT, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30220359Triticum aestivumHordeum vulgare63.5293.4997.34977forward
CNT30364932Triticum aestivumSorghum bicolor25.8860.2190.7398forward
CNT30103672Triticum aestivumOryza rufipogon18.432.4296.47283forward

Expression of CNT30303698

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MESSYYLSYGGCSLTDSYINTYYTLPFLIENCICGYCCFASLSVPNNELSLTAPYRDHRIDSNKPCLKRFVYGTPGNSTWSRRFN*

>peptide 2 (30 aa)
YLFHGFNLSRGSYSGNRNTHINSGSNSGME*

Sequence

>CNT30303698
CTACTTGTTTCATGGCTTTAATTTGAGCCGCGGATCCTACTCTGGAAACAGAAATACCCACATTAATAGCGGGTCGAATTCTGGCATGGAATAGATCCGC
AGATAAGAATATTTGTCCATCTGTAATGGAGATTACATTAGTAGGAATATAGGCGGAAACGTCTCCAGATTGAGTCTCAACTATTGGTAAAGCGGTCATA
CTTCCTTCGCCTAAAAGAGAATTTAATTTAGCGGCTCTTTCTAAAAGGCGTGAATGCAAATAAAAAACATCCCCTGGATAAGCCTCACGGCCGGGAGGTC
TTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCATAAATTATTAAAGTATGCCGTTCGCGGTACATAAAATACTCAGC
CAGGGCTGCTCCCGTATAAGGAGCGAGGTATTGTAATGTAGCAGGTGAATCCGCCATTTCAGCTACTACAATAGTGTATTCCATGGCCCCCTCCTCATGG
AAAGTAGTTACTACTTGAGCTAGTTCCAATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTTGAGCCGCGGATCCTACTCTGGAAACAGAAATAC
CCACATTAATAGCGGGTCGAATTCCGGCATTGAATAGATCCGCAGATAAGAATATTTGTCCATCTGTAATGGAGATTACATTAGTAGGAATATAGGCGGA
AACGTCTCCAGATTGAGTCTCAACTATTGGTAAAGCGGTCATACTTCCTTCGCCTAAAAGAGAATTTAATTTAGCGGCTCTTTCTAAAAGGCGTGAATGC
AAATAAAAAACATCCCCTGGATAAGCCTCACGGCCGGGAGGTCTTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCAT
AAATTATTAAAGTATGCCGTTCGCGGTACATAAAATACTCAGCCAGGGCTGCTCCCGTATAAGGAGCGAGGTATTGTAATGTAGCAGGTGAATCCGCCAT
TTCAGCTACTACAATAGTGTATTCCATGGCCCCCTCCTCATGGAAAGTAGTTACTACTTGAGCTACGGAGGATGCTCTTTGACCGATAGCTACATAAACA
CATATTACACCTTGCCCTTTTTGATTGAGAATTGTATCTGTGGCTACTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATGAACTCTCGCTGACCGCGCC
CTATAGGGATCATCGAATCGATAGCAATAAGCCCTGTTTGAAGAGGTTCGTATACGGAACGCCTGGAAATTCTACTTGGAGCAGGAGATTCAATTAAGCG
AGATTCGGAAGCTACAATTTCGCCTCTCCCATCAATAGGTTTAGCCAGAGCATTTATAACACGACCCAAGTTATATACGCTCACGGGTATCTGAGCAATT
CTTCCTGTTGCTTTTACAAAACTTCCCTCTTGATGCTAAACCATAGCTCTAACTGAGTCAAATTCCACAATTTCTAAGAACGATATGCTTTTTTTTCATT
TTCCACTTTGAAAGCTTCTCTCAATCCCTCCCTAGTCC