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Detailed information on CNT30303670


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 1e-48

BLAST vs NONCODE:
NONSTUT000620, E-value = 4e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30397102Triticum aestivumTriticum turgidum84.91101.3593.33450forward
CNT30252634Triticum aestivumAvena sativa44.5346.3796.19236forward
CNT30686644Triticum aestivumTriticum urartu9028.3194.13477forward

Expression of CNT30303670

Peptides detected in this lncRNA

>peptide 1 (66 aa)
INRKTAMRSLPDQNCKQAIQERYRTNSKLAQANLSKFTYSLLKDTAVPATVSTNITRGLDSFQTNT*

>peptide 2 (34 aa)
KQKDRNEIIARSKLQASNSRTIQNQQQISASKFI*

>peptide 3 (35 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVSVFTKICI

Sequence

>CNT30303670
ATAAACAGAAAGACCGCAATGAGATCATTGCCAGATCAAAACTGCAAGCAAGCAATTCAAGAACGATACAGAACCAACAGCAAATTAGCGCAAGCAAATT
TATCTAAGTTCACTTATTCATTACTTAAGGATACTGCAGTGCCAGCAACGGTTTCAACCAACATAACAAGGGGACTCGATAGTTTTCAAACCAACACATA
GGACTGACACGAACGAGAAAACAGTTCAAATGAACGGCAGGGCACCACCGACCAGACGACCCAGGATAAACCAGCAGGTTGAACGCCAGGGCAATTACTG
ACCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATA
AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGC
CCGTGAGTGTCTTCACAAAGATCTGCATCT