« Back to Triticum aestivum search


Detailed information on CNT30303462


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508435Triticum aestivumSolanum lycopersicum26.116.484.55123reverse complement

Expression of CNT30303462

Peptides detected in this lncRNA

>peptide 1 (57 aa)
IENHALDGCPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 2 (29 aa)
SKIMHWMDARALRRKDAFRGERPWGEIFL*

Sequence

>CNT30303462
TATCGAAAATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGA
TCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCAAACTGAAACATCTGAGTAGCTAAAGGAAGGA
AAAGCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGG
ATGATGGAAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCATAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCATTTTGGGGCGCAAGCA
TAGGCAACACAGGACTGATGACGGGGTGGGATTTGGAATTGGAATTGGAAGGTTTGACAGCCAAGGAGCGG