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Detailed information on CNT30303048


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 6e-85

BLAST vs NONCODE:
NONMTRT002043, E-value = 1e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30397549Triticum aestivumTriticum turgidum38.5279.8898.68532forward
CNT30667543Triticum aestivumTriticum dicoccoides99.8685.7198.691379forward

Expression of CNT30303048

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLKVGHNNLNRCNRNNNINFRVEPRQTAP*

>peptide 2 (52 aa)
MRCWWSRGMPSLSWIFAFTLSMVSKDSTSNMMVLPVRVLTKICIPPRRRSTR*

>peptide 3 (31 aa)
MVSDDSTSRVMVLPVRVFTKICICKYKVNPE*

Sequence

>CNT30303048
TGCAGCGACCAGCCTCAAACATGGTACTGACTTGTAAAAAATCTGAATAATGGTACTGATCCGTTACAACTGCAAGTGTTATACTTCCCTGCAATTAACT
CAAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAGGCTGCTTACCAGCAAAGATGAGATGCTGGTGGTC
TAGGGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCAAGGACTCCACCTCCAACATGATGGTCTTGCCTGTCAGGGTCTTG
ACGAAGATCTGCATACCACCACGAAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAATGTACAGCCATCCTCGAGCTGCT
TGCCGGCAAAGATGAGGCGCTGCTGGTCCAGGGAGATGTCCTCCTTGTCCTAGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCAACCTCAAG
GGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATTTGTAAATACAAAGTAAACCCAGAGTAAGGAGCAGTTGAAAGGAAACATGCAAACATA
AATAATACAGGTACAGAGAGAAATGAAATCCTAGCTACATATAAACGAAAATCTCAATATGAACCTAGTAAAAATCCCAATATATCAGCACAATCTTAAG
CCTGGTGAGAAGGATATATACTCTAAATCCTAGCAAAATCTATGCTCAAAGTGGGACACAACAATCTGAACAGGTGCAACAGAAATAATAACATAAATTT
CAGAGTAGAACCAAGGCAAACTGCACCATGAGAAAGCTAGTAGTAAACAAATCCAGAATCAAGAACCTAAAAGAACCCAGCATATAAACTTGGCAACAAT
CCTATAGAACCAACCTATCCAGCAAAACGTAACAGATTAAACTAGTAGCAAAACCTAGCAAAAGTTAACAAATCTATCAGCACAATCTTTGGCCTGCTGA
TAAGGCTATATAGTCTAACTCCCAGCAGATCTATCTGAAAAAGTGTATATGAATCAACAATAATAACACGAATTTCAGACTAGAACCGACAGGCAACTAC
AAGGGTGAACCATGAATAAGTAGGGTAAATAAATTCAGAATCTGGAGCCTAGCGGAATCAACCAGCTAGGCACACCTAGATGAAGCGAGCCAACAAAATC
GATGCATAGGACTACGACACGCAACCAAACGAGCGAAACCAATCAACCAGCCACGCACGCCTGATAGGGTGGGCCGAATCGACACCAATCGGACAATCGA
CGAGTGATCGAATCGACAGCAATCGATCAACAAGCAATAGCGCAGATCTACTGCAGACGACGGCTGCAAAGTACGATTAGC