Detailed information on CNT30303028


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30396960Triticum aestivumTriticum turgidum76.7197.5599.292266forward
CNT30440489Triticum aestivumAegilops tauschii5.2553.4586.45155reverse complement
CNT30667321Triticum aestivumTriticum dicoccoides76.7174.3999.512266forward

Expression of CNT30303028

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MKLMFRSACMKCDDFSSTGEVVLFPTLQRFQKIANWQCLNWSLDAYALL*

>peptide 2 (42 aa)
MEDSLISLYLKFVLLEYLLSSSKIHRSLFSGLCLATVCKTRK*

>peptide 3 (48 aa)
MGPPGHVLAAGWPCTIVRAGIPAREPDPSLSLRGPAFVDCFSLMRQIS*

>peptide 4 (36 aa)
MPDGLEPCERCSPCLRPCGWCLGSGILMIPSLKVIK*

>peptide 5 (60 aa)
MSCIGTPIPSRPWEGPFVVSKNLHNGSYYLIDVREHKDSCSSEEETRRLWNIALLRPYYA*

>peptide 6 (57 aa)
MPPFPSSTDQIRWRRWGLAERAAGWVQRCFAGMPHEVVQAHIKMGGRCTLVGQRFKA*

>peptide 7 (83 aa)
MLMPYCSQALHSHAPSIDDISKEYHRVASNTIHPAQGRSHPRRLSFFLQVIDAAMFVDTWYNPLAVHSRLLASFCLVTHVWHT*

>peptide 8 (49 aa)
MWLVPRFWYPDDSIIEGDQVDYLPDKVLAHQGRTGAALNSKILQSTRSM*

>peptide 9 (34 aa)
MDDEVAGAPSMPKNTVDAGPPERAILYRSWSILV*

>peptide 10 (31 aa)
MEWIDRRKDVGDFGGSVLIRGRKKGSFADFL*

>peptide 11 (32 aa)
MFGIHSLSVHQMQMVAASLVYAIFRDDMCFHD*

>peptide 12 (30 aa)
MHTRRTEIQGITTNLWMMKSRELLPCRRTP*

Sequence

>CNT30303028
GACGCTTCGAGCTAGTACTACCATTATTCCACTGAGCTGAGCTTCGTGAGAGAGAGGATTCGAGAAAGTGAGGTCCCCCGTCCGGCAGTCCAGGCTCGTG
GTCGTGGCCAGCGACAAAGGGAGCAGCCGCTCCTGCCGGTGCTGCCGCTGCCCGACTCCGGCGCGCCCAAGCCCCGACCAAGGCTGGAGTAGCTGCTCTG
GCATGCCGCCGTTCCCCTCCTCGACTGACCAGATCCGTTGGAGAAGGTGGGGACTTGCAGAGCGCGCGGCCGGCTGGGTGCAGCGCTGCTTCGCCGGGAT
GCCGCACGAGGTTGTGCAGGCGCACATCAAGATGGGAGGCCGATGCACACTCGTCGGACAGAGATTCAAGGCATAACAACAAACCTATGGATGATGAAGT
CGCGGGAGCTCCTTCCATGCCGAAGAACACCGTAGATGCTGGTCCACCTGAGAGGGCAATTCTCTATCGATCCTGGTCTATTCTCGTGTGATCCACAATG
GAGTGGATAGATAGGAGAAAGGATGTTGGAGATTTTGGCGGCAGTGTGTTGATACGCGGGAGAAAGAAAGGCAGTTTTGCTGATTTTCTGTAATTAGAGA
TATACCATCTGGTTGTTTGGGTGATGGGTCCACCAGGCCACGTGTTGGCCGCTGGTTGGCCCTGCACGATAGTGCGTGCAGGGATCCCAGCACGAGAGCC
CGACCCATCTCTGTCACTGAGAGGACCCGCATTTGTTGATTGTTTTTCTTTGATGCGTCAAATTTCCTAGTTAGAAAACTTTCTACTTTCTGAAAGTAGA
ATTGCAAGCAAGCAAAAATGGTAGTCCCTGTCTTTCAGTTCTATAAACATATTATTTCATACACCAAAAGTAGTATGACCCCCTACATGTTTAAATAGTA
CAAACATTGTTAACATCATCTTTTGTCTAAAACGCACCGTAGCACCTTTCCTGGTCATTATTTAGTCTGGAATTCTGTATTTGCACCATGTGATGGTCCT
ACTTTAAAAATGTTTTGGCCTCTATCTGGTTAAATGTTTGAAAAATTGGATCCTTTATGTGAACCAGCATGATTCTCTCTATTACTCGGCAATAGCGTGT
TATTCACATAAGTTCAATTGTGTTTGAGATATGGATAGTGGCCTGGTGCTACATTAGAGTTTAGGGGACTATCTGGGTCCAAACTGTTTGTAGCATAGTG
GTCAGCATGCTATTGTTCTAGTCAGGATCCCTGATGTGATTCCCTCAGGCAGGTACCCCAATGATTCCATTGTTGATGGCGATCAAGCAGATTACCTACC
TGATAAGATTCTGCCCAACTAAGGGAGAAGTGGAGCTGCTCTAACCTCTAAGCTTAGTTTTGCCAGTGATACCATGGATGCCAGATGGACTTGAACCATG
TGAACGATGTAGTCCGTGTCTACGCCCATGTGGCTGGTGCCTCGGTTCTGGTATCCTGATGATTCCATCATTGAAGGTGATCAAGTAGATTACCTACCTG
ATAAGGTTCTAGCCCACCAAGGGAGAACTGGAGCTGCTCTGAACTCAAAGATTTTACAGTCTACAAGGAGTATGTAGGACACTTCCAATAGGTCATCTTG
GCGATCTAGGGGGGAGAAGCTACAACATAGCAAGCCTTCAACCATGGTCATGATGGCCTGGCAGCAGTACAATAACATGTAGCCTTGTTTGTCGTGTGAC
GACGGCAAAGGTGTTGTATAGTCTCTGGCCACCAAAAACTGGTTTAGATATTTGTTCCATCCTTTGATCACCAGCAGCATTTGTGTGCATGCATAAAATG
TGACATTTGTAGATCTGAATGGAAGACTCACTTATTTCCTTGTATCTTAAATTTGTATTGTTGGAATATTTGCTTTCTTCTTCCAAGATTCATAGATCAC
TATTTTCAGGATTGTGCTTAGCTACAGTTTGTAAAACTAGAAAGTAAGGGAAATTACTATGTATTTCATTCTTAGATGATGAGTAATGTTTTTGACTTGA
ATCGGTTCGAGAACATAGCTTTTGTTTTTAGTTGATTTCTTAAACTATTATGGAGTAGCTACTGCTATTATATTAACAAGTGAACCAGATGCAGTGATCA
GCCTCTGGCGGTCAACTCTGTATTGACTCCATTTGATGAAACTTATGTTTAGGTCTGCTTGTATGAAATGTGATGATTTTTCGTCTACGGGCGAAGTTGT
ATTATTTCCAACCCTGCAACGGTTCCAGAAGATAGCAAATTGGCAATGTTTGAACTGGAGCTTGGATGCTTATGCCCTACTGTAGCCAAGCTCTCCATTC
ACATGCACCCTCCATAGACGACATCAGCAAAGAGTACCACCGGGTCGCAAGCAACACCATCCACCCTGCACAAGGTCGCTCCCACCCAAGACGCCTTTCT
TTCTTCCTTCAAGTTATTGATGCTGCTATGTTTGTAGACACTTGGTACAATCCACTTGCTGTTCACAGTAGACTACTTGCTAGCTTTTGCCTAGTTACTC
ATGTTTGGCATACATAGTCTCTCTGTTCATCAAATGCAAATGGTCGCTGCTTCGCTAGTGTATGCAATTTTCCGCGATGATATGTGTTTTCATGACTAGA
TTTTGTATGGTGGAAGTTTAGTAGGTTCCATGGTGTAGAGTGGCCTCTGCCATGTCTTGTATTGGAACTCCAATACCAAGTAGACCTTGGGAAGGGCCCT
TTGTGGTCAGCAAGAATCTGCACAATGGATCATACTACCTCATTGACGTTCGAGAGCACAAAGACTCATGCAGTTCTGAGGAGGAGACCCGGCGGCTGTG
GAACATAGCTCTCCTTCGGCCTTACTACGCCTGAGCTATAGGCTCCTCTTATGTACATATTTCGACAATGTATATATTATGATCAATATTATAAACCGGC
TTCCTTGCTATAAGCAGGGCCTCTGCCGTTTTTTCCAATACCTTTTGATTACAT