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Detailed information on CNT30302644


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-96

BLAST vs NONCODE:
NONMTRT002042, E-value = 4e-47

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30666718Triticum aestivumTriticum dicoccoides26.0273.4294.27489forward

Expression of CNT30302644

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVSVFTKICICKEESHGQEIKKNLKGDGKNKEADQANSQ*

>peptide 2 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTNICMPPRRRRTRWRVDSFWML*

>peptide 3 (60 aa)
MDKLTMMEQETQMHGQAHNDGTTNRNAWTSFYSSSIFFSLIKILKIIGPSVCNTNVYRFH*

>peptide 4 (29 aa)
MHRLTNGTTCHQGIHPDQPIQYAKSLRIR*

>peptide 5 (72 aa)
QTRTAKANEHRHITSKLTYSYLTVQMYLQLFAPNHRTRWSIKAADTVRLHTNETSLEQRRHRVQQQQQQVKR*

Sequence

>CNT30302644
GCCAGACAAGAACTGCAAAGGCAAATGAGCACAGGCACATTACTTCAAAGTTGACTTATTCATACTTAACGGTACAGATGTACCTGCAACTGTTTGCACC
AAACCACAGGACTCGATGGTCCATTAAAGCAGCAGACACAGTACGACTTCACACAAACGAGACATCACTTGAACAAAGGCGACACAGGGTACAGCAGCAG
CAGCAGCAGGTCAAACGATAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGC
GACCATCCTCCAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTC
GGAGCTCTCGACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAATATCTGCATGCCACCACGCAGACGCAGGACAAGGTGGAGGGTGGACTCC
TTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGA
TCTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGTGTTTTCACAAAGATCTGCATCTGCAAAGAAGA
ATCGCATGGACAAGAAATAAAGAAGAACCTCAAGGGTGATGGTAAGAATAAAGAAGCAGACCAGGCAAACTCACAATGATGGAACAACAAATACTAATGC
ATGGACAAGCTCACAATGATGGAACAAGAAACACAAATGCATGGACAAGCTCACAATGATGGAACAACAAACAGAAATGCATGGACAAGCTTCTACAGCA
GCAGCATATTTTTTTCATTAATAAAGATATTAAAGATCATAGGGCCAAGCGTATGTAACACAAATGTCTACAGATTTCATTAATCTAATGATTCAACATA
GCAGCCAGACATGCTTACATTATCTAAGATAGCTTCAGGGTAACAAATCAAGCACATCTGACACTAATCTACATGTATTTGCTAACTCAATGATTCCACA
AGCTTCAGGAGAAAAACATCTACAATCCTATGCCTATTAGGACGATCTTGGTACAACAGCAATCAGATAAAAAGCAATAGATCAGGCAGCTACTATTTAG
GATCATAAAGATTTACCAAGCCAGAGCGGAAATGTAATAATAGATAAAACATGCATAGATTAACATATGAGACCATACGGCATCACGAACTCATGTGGAA
GACGGATATTAACCCTAAAGTAAAAAATAGGAAATAAACAGAAAATCCCTACGAATTCACTAAAGCTTAACCAATCTACCAACGCAGATATATAAGCTTA
TACACCAAGCCAGAGACTCAAACAGACATATTTTCTTCATCAAAGAGATACCAGCGAGCAAATAGGTTCATGCACATCTAGACTATCAATTTTCTCACGG
ATTTGCATATAGTTGTTGGGCATGCTATCAGAACGAAACCTATCTTCGGGTCAAACCAATCTACAATCTTAGGCCTACAGATCAGGCAGTAGACGCGTCT
AGAGATAATTTTATATGGTATAAAAGCTACTTGGGCGAATCTATCAAGCAGGAAGACGAACTAGTACATAAACATGCATAGATTAACAAACGGGACCACA
TGTCATCAAGGAATTCATCCTGATCAACCCATTCAATACGCGAAATCCCTACGAATTCGCTAAATCTTCACCGATCTAACAACAGATCGGAGCCAAATTC
CACAGTACCACACGTCCAACGAGAGCACTACGGAAACGTAGATCTAGACGATACGGGGAGAGGGGAAGGAATCGCCGTA