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Detailed information on CNT30302127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30666951Triticum aestivumTriticum dicoccoides8.4822.0688.7162forward

Expression of CNT30302127

Peptides detected in this lncRNA

>peptide 1 (88 aa)
EASRSQQNISDRPIRTAADDPFPSAAVLVAPPRRGEAAVPREPGMELEKGGLLMLGAGTGRRGQGDQQHESEAKARKEKQGIRERNSR*

>peptide 2 (81 aa)
RPREASKTSVTVLLGLLQMTPSQVQQSLLLRHVAARPPSHESPAWNWRREASSCSVQELAGEAKETSSTRARPKQGKKSRA*

>peptide 3 (55 aa)
MRREDRTERRLRLRAIIMVCRQRPSGGQEESAVSWLPGLMDGVGGRSVRSPPSPS*

Sequence

>CNT30302127
CGAGGCCTCGAGAAGCCAGCAAAACATCAGTGACCGTCCTATTAGGACTGCTGCAGATGACCCCTTCCCAAGTGCAGCAGTCCTTGTTGCTCCGCCACGT
CGCGGCGAGGCCGCCGTCCCACGAGAGCCCGGCATGGAACTGGAGAAGGGAGGCCTCCTCATGCTCGGTGCAGGAACTGGCCGGAGAGGCCAAGGAGACC
AGCAGCACGAGAGCGAGGCCAAAGCAAGGAAAGAAAAGCAGGGCATAAGAGAAAGAAACAGTAGGTGAAGAAGATTTTGCGAAGATTCTACCGGGCGAGA
CAATGCGCCGGGAAGATCGTACCGAAAGGCGCCTGCGATTGAGAGCAATCATCATGGTGTGTAGACAAAGGCCAAGTGGAGGGCAGGAAGAAAGTGCAGT
TTCCTGGCTTCCTGGCTTAATGGACGGGGTGGGTGGTCGATCCGTGCGGTCTCCTCCATCCCCTTCTTGACCCGGGGGCGTTTACTTGCCCTTGTCACGC
GTGCGTGCGTGCGAGCTTCGTCTGATGTTTACGTTTGCTCTTCTTTTGCCATTCTCCTGGCTCCACTGGCGCACTATAATTGCGGACCGTGGACGGTGAC
GCTTTGTGGCTGTCATCTGAAGTTTGAACCGTAACTTGGGGTGCTGGCAATGGTGATGCTAAGTACAGTTTTCTACTCCTATTACTGTTGTTTTGGAATG
TTAATTAGTTTACTTGAATACAAAGGTGGTG