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Detailed information on CNT30301550


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43217|H2B3_WHEAT, E-value = 5e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30179872Triticum aestivumSecale cereale75.6662.9693.57544forward
CNT30396147Triticum aestivumTriticum turgidum57.4475.597.09413forward
CNT30722188Triticum aestivumTriticum spelta59.2562.3798.12426forward

Expression of CNT30301550

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSLMKEFMMDMALEEMPMSGCTCLSTLKM*

>peptide 2 (29 aa)
MSLMKEFMMDMALEEMPMSGCTCLSTLKM*

Sequence

>CNT30301550
CCAAAACTGAATAAAACAAGCACACGTTGAACAATAATTCAGACAGCAACATCACTAATTCTTCAAACCAACAAGCAGCACAATTCTTACAGAGATTGTA
ACATCGCACTGCTAACTACACACAGAACGCCGCCATCAGCTCATGAAACGAGGAAGACGCCTAGGCTGAGGTGAACTTGGTGACGGCCTTGGTGCCCTCG
GAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGGGCCAGCT
TGGCGGACTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTT
GAGCACCTTGAAGATGTAGATCTTGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGGGCCAGCTTGGCGGACTCGCCGGCGAGCTTCT
CGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTGAGCACCTTGAAGATGTAGATCTT
GTACGTCTCCACGCTCTTCTTGGCCTTCTTCTTCCCCTTCTTCTCGCTGCCCTCCTTGGACGCCGGCGGCCGCTTCTCGGCCTTGGGCTTCTTGCCCGCC
GGGGCCTTCTCCGTCGCCA