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Detailed information on CNT30301530


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-97

BLAST vs NONCODE:
NONMTRT002042, E-value = 1e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691328Triticum aestivumOryza sativa26.0262.0893.04460forward
CNT30191038Triticum aestivumSecale cereale28.1155.9196.98497forward
CNT30143305Triticum aestivumLolium perenne26.3669.9793.99466forward
CNT30115854Triticum aestivumOryza nivara26.4762.0793.16468forward

Expression of CNT30301530

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLIREKTRHTKLLLDSIIESLRRYQGGRQN*

>peptide 2 (33 aa)
FRSQKAAKVDCQIKTRSGNQFNRKILKKTVKYT*

>peptide 3 (31 aa)
MSSQRSASAENNTKQDNEPLEADQANPHYKY*

>peptide 4 (41 aa)
MHMRSDGIMNWLRRRTDLGEHDIYRHNPYDFIYTHNSYEFA*

>peptide 5 (47 aa)
MRRCWSGGMPSLSWIFALTLSMVSDDSTSRVMVLPVNVFTKICICRE*

>peptide 6 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVIVLPVRVFTKICIPPRRRRTRWRVDSFWML*

>peptide 7 (88 aa)
MKPDMIVGLDTNETNTSHGRQGHPPEHPRQLLTTAEAEHQVESGFLLDVVVGKGAAILQLLASEDETLLVRGNALLVLDLGLDVVDGV*

Sequence

>CNT30301530
TTCAGATCACAAAAGGCCGCAAAAGTAGATTGCCAAATAAAAACTAGAAGTGGCAACCAATTTAACCGGAAGATATTAAAAAAAACAGTAAAATACACAT
AGGCAGATTAGTTCAAAGTCCACTTATTCATACTTGACCGTACTGCTATTCCAGCAACTGTTTAAACGAAACCAACACACATCTCACGGGGACTCGATGG
TCCATGAAACCAGACATGATAGTAGGACTTGACACAAATGAGACTAACACTTCACATGGAAGACAGGGGCACCCACCAGAGCACCCACGGCAATTACTGA
CCACCGCGGAGGCGGAGCACCAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGA
GACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGAGTGATAGTCTTGCC
AGTAAGGGTCTTCACAAAGATCTGCATACCACCACGAAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCG
TCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATTTTTGCCTTGACGTTGTCAATGGTGTCAGACG
ACTCCACCTCAAGGGTGATGGTCTTGCCTGTCAATGTCTTCACAAAGATCTGCATCTGCAGAGAATAATACCAAACAGGATAATGAGCCTCTAGAAGCAG
ACCAAGCAAACCCACATTATAAATACTAATGCTTCTATACATCAAGTCATAGAGAATAAACAGCAGCAGCAGCATATTTTCTGCAAAAAAGCAGTATGCT
CATCAGAGAAAAAACAAGACACACAAAATTACTATTGGATTCAATCATAGAGAGTTTAAGAAGATATCAGGGAGGAAGACAGAACTAGTAGAGAAAACAT
GCATATGAGGCAAGCAAACTAACATCATAAATACTAATGCATTTTGTAAGCTTTTACACATCACGCCATAGAGAATAAACAATGGGCAGCAGTATATTTT
CCTTATATTGATTAAAGAGGAACTGACAGAACATGTACCACAGAAAATCCACAGATATCTTTTATCTAGGGCTCCATATAGCTGTCGGATATTATCATCT
TCTAAGAAGATAAACCTGGCTTTGAGAGGGAAAACAATCAACAATCCTAGTCCTAGGCCTATAAGGAGTTTAAGGACGATCCTGGTACGACAAGAACATG
ATCACGAGCGACGGATCTGGCACACAAAGCTACTACTGGATTCGATCATGAAGACTTAAGCGAATCTATCAAGCAGGAACGGACGTCCTAGTAGAGAGAA
AACATGCATATGAGATCAGACGGCATCATGAATTGGCTCCGAAGACGAACAGATTTGGGAGAACACGACATCTACAGGCATAACCCCTACGATTTCATAT
ACACGCATAATTCCTACGAATTCGCTTGAAGCTTCAGCTATCTAACATGAGCGATTGATCGGGACAACAAGCTTCGTTCCCGCAACCCCAGATCGGAGCA
TAACCGGGCAAAATTCGACGGCAATAATCCTCCAACTACCACGGAAACGTGGATCCGGACGGTACGGGGAGAGGGGAAGGGAATCGCCGTACCTTGGGGC
GGTGGGGGAGGACCGGAGGAGGGGGAGCTGGAGTCGACCGGAGACGAGATCGGCTGGGGGATTTGTTG