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Detailed information on CNT30301451


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 3e-62

BLAST vs NONCODE:
NONATHT001922, E-value = 7e-14

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30708643Triticum aestivumGlycine max82.453.1579.66295forward
CNT30189384Triticum aestivumSecale cereale76.2634.7397.07273forward
CNT30225935Triticum aestivumHordeum vulgare36.0329.4597.67129forward
CNT30508545Triticum aestivumSolanum lycopersicum32.428.0286.21116forward
CNT3014998Triticum aestivumZea mays75.748.9286.72271forward
CNT30597069Triticum aestivumOryza meridionalis98.617.6488.95353forward
CNT30101941Triticum aestivumOryza rufipogon92.4639.6488.22331forward
CNT30496713Triticum aestivumDigitaria exilis92.4621.9887.92331forward
CNT30551132Triticum aestivumOryza brachyantha35.7533.1694.53128forward

Expression of CNT30301451

Peptides detected in this lncRNA

>peptide 1 (46 aa)
AEVTVCRRLEVKVDDDHAWPEVKVLLDNLEDLLVRDLARAVCVNKH*

>peptide 2 (42 aa)
MMIMPGLKSKFSLTISRISLSGILPVPYVSTNTESGSGTPIA*

>peptide 3 (38 aa)
MQRRAMPLATMLFAACLATYAPLRSTLVGSLPEKAPPP*

Sequence

>CNT30301451
GCCGAAGTGACCGTATGCCGCCGTCTTGAGGTCAAGGTTGATGATGATCATGCCTGGCCTGAAGTCAAAGTTCTCCTTGACAATCTCGAGGATCTCCTTG
TCAGGGATCTTGCCCGTGCCGTATGTGTCAACAAACACTGAGAGTGGTTCAGGCACGCCAATAGCATAAGACACCTGGACGATGCAGCGGCGGGCGATGC
CACTGGCGACAATGCTCTTCGCCGCCTGCCTTGCAACATATGCACCACTGCGGTCAACCTTGGTCGGGTCCTTGCCAGAGAAAGCACCTCCACCATGAGC
TCCCCAGCCACCATAGGTGTCAATGATGATCTTCCTGCCAGTGAGACCAGCATCGCCG