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Detailed information on CNT30301196


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184167Triticum aestivumSecale cereale26.4159.2886.64262forward
CNT30440859Triticum aestivumAegilops tauschii21.0758.3887.08209forward
CNT30459719Triticum aestivumSaccharum spontaneum8.3733.0787.9583forward
CNT30687812Triticum aestivumTriticum urartu16.9475.6888.1168forward

Expression of CNT30301196

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MQLQIKLISSVWAQRPTGPLDPRPDRGRPTLFWLVGPCDPRYINRGGGRGMSDEVNCCHKPHRYPLPI*

>peptide 2 (47 aa)
MNKCDIRKEGKDIQVEPNRIVAWDAAANKVDLLCVGPTAHRALRSAP*

Sequence

>CNT30301196
GCCATTTTAAGGTAACACTTACAATTGCATAGCCGGTCCCAAGCCCGGAAAAAGGAGGAGGGACCAACCATGTGTTCTTATAGGTTAAAGTGTGGTGTTG
ACTCCCATTTTATATATAGTAGAAATGAACAAATGTGATATTCGCAAAGAAGGAAAAGACATCCAAGTGGAGCCAAACAGGATTGTCGCCTGGGATGCAG
CTGCAAATAAAGTTGATCTCCTCTGTGTGGGCCCAACGGCCCACCGGGCCCTTAGATCCGCGCCCTGATCGGGGGCGCCCAACCCTCTTCTGGTTGGTGG
GCCCCTGTGACCCGCGCTATATAAACAGAGGTGGGGGCCGCGGCATGAGTGACGAGGTTAACTGCTGCCACAAACCCCACCGGTATCCCCTACCGATCTA
GGGTTAGTGCGGTGCTCACGGGAAGCACACCACCGCCACCATCTCTTTGCCATCACCGGCCACTACTTTGCCATGGCCGGCACCGGCTCGAGCTCTTCAA
CCCAAGGAGAAGGTGGCAGTGATGAGTGAGGTGATGACTGATGACACAAGTTGCAGCCGCCAGCAACAGAAATAACCGAAGTCCATCTTGTTCCCCGGCA
ATTCTGGCCAAGTGATATCCCAGGGTATTTCCAAGGAGGGCACATCTGTGTGCAGGTCCTTTTTGTTATTTACCTCGCTCGCAGCGAACGGCAACACCCG
GGACTCTGAATCCCTCGTTTTTACTCAGCCTCAGCAATAGCACCTACAGGCAGGCTGGTGCCGGCGCAGAATAGGTAGCACGACGAAGCTACTTGTTCGC
GCAAGCCTAGAGACGACAATGAGAAAAACAAAGTCTGGGCTGTAGCATACTGTGTTTTGTGCTTGTTATTGTAAATCTACAAGCGTGTCCGTCTGAATTA
AGTGTGCATGAGTATCAAATGGACAAACAAGGCAAGTAACTGGTGCAAAAATGCTGAATTTGGTCAGGCAAAATGTTCTCTTTTGGTCCAAA