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Detailed information on CNT30301098


BLAST search results

BLAST vs Swiss-Prot:
sp|P06528|ATPF_WHEAT, E-value = 3e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30511193Triticum aestivumSolanum lycopersicum41.7617.4483.5309forward

Expression of CNT30301098

Peptides detected in this lncRNA

>peptide 1 (32 aa)
FQLFQTNRSSINQICFFSFYLRVSIHSILIRF*

>peptide 2 (58 aa)
FSNCSKLIEVALIKFAFSRSISEYPFIRYSSASSSTFCNRIRAFSSCSMVPLRNSSEF*

>peptide 3 (89 aa)
MASELKKMKEWVTFFICSPLIDRTNKEQSFSITYFARPFLIGFFNANRFNLVISFRLSLTSCLTGERLPLLKFSVPKIPKIKGKNFPLS*

Sequence

>CNT30301098
TTTTCCAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATCTCAGAGTATCCATTCATTCGATACTCATCCGCTTCTA
GTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTACGCAATTCTTCTGAATTTTGAATAGTACTCAAGATCCTCTGTTT
TCGATTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAAATCAAAACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATTGGTA
TTAAGCCCGAAACTGCCAGCGGATGGCCAGTGAGCTAAAAAAAATGAAAGAATGGGTTACATTTTTCATATGCTCTCCTCTTATAGATAGGACGAACAAA
GAACAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGGTTTTTTTAATGCAAATAGATTCAATCTAGTAATTTCTTTTAGATTAAGTCTTA
CGTCTTGTTTGACCGGTGAAAGACTTCCTTTGTTGAAATTTTCTGTTCCCAAAATTCCTAAAATAAAAGGAAAAAACTTTCCACTTTCCTAAACTAAGGA
CGGGAAATAAGAAGGTGAGCATATCTTCTAAATTAATAATACTCAACTCAGCCCTTCCTAGAATGGGGTATTATCTGTCCCGATAAATAGATAATTCCAG
GAGTAATAAATAGGAGTAAATTAAATAAAGTATTGATATA