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Detailed information on CNT30301052


BLAST search results

BLAST vs Swiss-Prot:
sp|P12112|ATPA_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONZMAT000296, E-value = 9e-132

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201764Triticum aestivumPisum sativum27.0989.2186.12670forward
CNT30710758Triticum aestivumGlycine max8.0566.5687.44199forward
CNT3095993Triticum aestivumSolanum tuberosum34.9421.5983.91864forward
CNT30554216Triticum aestivumOryza glaberrima24.3492.3396.35602forward
CNT3018020Triticum aestivumZea mays60.2536.1995.231490forward
CNT30353938Triticum aestivumEragrostis tef23.2198.893.38574forward
CNT30371010Triticum aestivumOryza glumipatula36.7299.3493.06908forward
CNT30551824Triticum aestivumOryza brachyantha7.0871.7295.43175forward

Expression of CNT30301052

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MESSYYLSYGGCSLTDSYINTYYTLPFLIENCICGYCCFASLSVPNN*

>peptide 2 (36 aa)
MPILARIVRKCNSVFKQLFRVPRAPCTACWKTRCRT*

>peptide 3 (39 aa)
PLDKPHGREVFLIEGTFGDKLVPVWRDHHKLLKYAVRGT*

>peptide 4 (62 aa)
MVPLRNSSEFQIVLKILCFRLSNKSFNTPFPKKIKTPTTTVRFIRFVAKISVLSPKLPADGQ*

Sequence

>CNT30301052
CCCCTGGATAAGCCTCACGGCCGGGAGGTCTTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCATAAATTATTAAAGT
ATGCCGTTCGCGGTACATAAAATACTCAGCCAGGGCTGCTCCCGTATAAGGAGCGAGGTATTGTAATGTAGCAGGTGAATCCGCCATTTCAGCTACTACA
ATAGTGTATTCCATAGCCCCCTCCTCATGGAAAGTAGTTACTACTTGAGCTACGGAGGATGCTCTTTGACCGATAGCTACATAAACACATATTACACCTT
GCCCTTTTTGATTGAGAATTGTATCTGTGGCTACTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATTAACTCTCGCTGACCGCGCCCTATAGGGATCAT
CGAATCGATAGCAATAAGCCCTGTTTGAAGAGGTTCGTATACGGAACGCCTGGAAATTATACTTGGAGCAGGAGATTCAATTAAGCGAGATTCGGAAGCT
ATAATTTCGCCTTTCCCATCAATAGGTTTAGCCAGAGCATTTACAACACGACCCAAGTAAGCCTCACTCACGGGTATCTGAGCAATTCTTCCTGTTGCTT
TTACAAAACTTCCCTCTTGTATCATCAACCCATCGCCCATTAATACAATCCCAACATTTTTGGATTCCAAATTCAGAGCAATACCCCTAGTACCTTCTGC
AAATTCGACTAATTCTCCTGACATTATTTCACCAAGACCTATAATACGAGCAATCCCATCCCCCACTTGAACTACGCGACCTATATTCTCAATCCCTACT
TTCCTATTATATTGTTCAATACGTTCGCGGAGAATTTTATGAATTTCGTCGACTCGAAGGGTTGCCATTAGTGTTTCTTGACTCTTTTTTCGGAAGCAAG
GGGAAAAATAATGCCTAAATTCTAAACGAAAGTAGAAGTTCAAGGCCTAATTAATTTAATTATCTCTTCCATTCCAGGGACCCGAGAATGCCAATATTAG
CACGAATCGTACGGAAATGTAACTCGGTATTCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTACGGCCTGTTGGAAAACCCGCTGTCGGACCTGATT
CATTGCCCTTTGTTTTTCAAAATAAAGGGTTTCGTTTTTAGACTTTTCCAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGT
TCTATCTCAGAGTATCCATTCATTCGATACTCATCCGCTTCTAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTAC
GCAATTCTTCTGAATTTCAAATAGTACTCAAGATCCTCTGTTTTCGATTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAAATCAAAACACCAAC
CACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGCCCGAAACTGCCAGCGGATGGCCAGTGAGCTAAAAAAGGGCAGGGTGCCCCC
TTTTTTTTTCTAGTAAATAGTTCAAACCATTTTATCGATATGAGTGTTCTATATCAGATAAATTTTACATTAGCTATTTCCCGTTTAAATTCGGTACTAA
TACTAATATAGTTGTAGAAAGAGTACCTCTTTTTGCCTGGACTTCAAGCAGTTTAGCTTTAACCGTGTTAATGGTCTCACATTCTTGGTTTATAGAGAAT
CAAAGTTGATTTACCAATGAGTCGCGAAATGCTATGGTTCTTCCATATGATTTCTGAATTTATTCAGAAGTAATTCGTCGAGATCGTGCACCCTTTTCTT
ATTTATCCGAAAAATACTAAAAAATATTATAAAGTGCAGCCGGATAGATCCAATCTATTCTTGAAATAGACAACTCGCACACACTCCCTTTCCAAAAAAA
ATCAAAACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGTCCGAAACTGCCAGCGGATGGCCAGTGAGCTAAAAAAA
CGAAAGAATGGGTTACATTTTTCATATGCTCTCCTCTTATAGATAGGACGAACAAAGAACAAAGTTTTTTGATCACTTACTTCGCTCGCCCTTTTTTGAT
CGGTTTTTTTAATGCAAATAGATTCAATCTAGTAATTTCTTTTAGATTAAGTCTTACGTCTTGTTTGACCGGTGAAAGACTTCCTTTGTTGAAATGTTCT
GTTCCCAAAATTCCTAAAATAAAAGGAAAAAACTTTCCACTTTCCTAAACTAAGGACGGGAAATAAGAAGGTGAGCATATCTTCTAAATTAATAATACTC
AACTCAGCCCTTCCTAGAATGGGGTATTATCTGTCCCGATAAATAGATAATTCCAGGAGTAATAAATAGGAGTAAATTAAATAAAGTATTGATATAATTG
GAATTGCGGAAGCAAATACCAATTTACTAAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAATTTTTTTT