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Detailed information on CNT30300699


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094274Triticum aestivumSolanum tuberosum39.3371.8698.58212forward
CNT30484247Triticum aestivumChara braunii24.39.4190.08131forward
CNT3099471Triticum aestivumOryza rufipogon35.4475.79100191forward
CNT3019347Triticum aestivumCyanidioschyzon merolae22.454.4287.6121forward

Expression of CNT30300699

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNQRLSLPSHTSVTL*

Sequence

>CNT30300699
CCCGCGGCGCAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACTGGTACACCATAGGTTGACCCAGCCCAGTCCTCTCGT
ACTAGGGCTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTCAT
CGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAGGAGCTCTTGGGAGTC
ATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACC
AGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCAACGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCAT
CCGCCCCAGATAAACTACCCACCTCGCAGTGTCCCGCCC