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Detailed information on CNT30300524


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8S8W0|CYB6_ATRBE, E-value = 1e-62

BLAST vs NONCODE:
NONSTUT000261, E-value = 5e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30149347Triticum aestivumBrachypodium distachyon30.8127.3194.91216forward

Expression of CNT30300524

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MICLPYKGPEIPCLRIIGKCININSAVSRGSTKVCQL*

>peptide 2 (41 aa)
GSAGSPIIDGSRTAKPTLHAIVPRITTGKIYKRSLGRAGSP*

Sequence

>CNT30300524
CGGATCTGCCGGTTCACCAATCATTGATGGCTCGAGAACCGCTAAACCTACATTACATGCAATAGTACCTAGAATTACTACTGGAAAAATATATAAAAGA
TCGTTGGGCCGTGCGGGTTCCCCGTAATAATTATGTCCCATCCCTTTAGCTAATTTAGCTCTTAATACAGGATCATTTAAGTCTGGTTTCTTTGTTACTC
CCATAATCCGCCTTTTTTCTTTCGTAAAATTAACTTCAACTATTTGTATTGTATAAAAATACTTTGGAGTTGAAGAGAAGTATCCAAATGACATGTGTTA
TTTTACAATAACCCATGCTTGTAGCAATGAAATACCAAAACCTACCCGATATGATATATGATAATTATAATTCTCTATGATATGCCTTCCCTATAAAGGA
CCCGAAATACCTTGCTTACGTATCATTGGAAAGTGCATTAACATAAATTCGGCAGTAAGCAGAGGCAGTACAAAGGTATGTCAACTATAAAAACGAGTCA
AAGTGGATTGGCCCACACTAGCACTTCCGCGTAATAACTCCACTAAAGGCGATCCTATTACCGGAATGGCGTCAGGTACACCTGTCACAATTTTGACTGC
CCAATAGCCAATTTGATCTCAAGGCAAAGAATAACCAGTTACACCAAATGATGCAGTCAAAACAGCCAAAACCACACCTGTGACCCAAGTTAATTCACGG
G