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Detailed information on CNT30300474


BLAST search results

BLAST vs Swiss-Prot:
sp|P13192|PSAF_HORVU, E-value = 1e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641545Triticum aestivumNymphaea colorata25.0232.3586.91275forward
CNT30629005Triticum aestivumVigna unguiculata28.8454.3780.13317forward
CNT30187643Triticum aestivumSecale cereale45.3147.0396.39498forward
CNT30224070Triticum aestivumHordeum vulgare11.2855.61100124forward
CNT30394054Triticum aestivumTriticum turgidum76.6285.1493.71842forward
CNT30562386Triticum aestivumActinidia chinensis28.1256.5978.64309forward
CNT3086176Triticum aestivumVigna radiata33.345.2479.78366forward
CNT30664762Triticum aestivumTriticum dicoccoides51.6895.7897.54568forward
CNT308929Triticum aestivumZea mays22.4782.0695.55247forward
CNT30349983Triticum aestivumEragrostis tef12.0153.8893.18132forward
CNT30579105Triticum aestivumEchinochloa crusgalli23.2924.2495.31256forward
CNT30174403Triticum aestivumVigna angularis16.5626.1982.42182forward

Expression of CNT30300474

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MILSAPTPSPRRSTPQALNPPLPICQSKQERKIH*

>peptide 2 (29 aa)
MCDRSRGEGWACSLCGFVSGGDKGRGASG*

>peptide 3 (96 aa)
MVAWMASAGAESGAYFLSDELSFFTDCFSRLANALDSLHGVRPAMSAAAGGGEVAAEERSTDESASAAEKVLMEAVRAAIAASVARAGERVEGFDV*

>peptide 4 (56 aa)
FRNGGSTDYYKNINLFSNLSFLCMLAHFHSWYAVHHEMVLNNLNNCKTHICEERRQ*

Sequence

>CNT30300474
TTTAGGAACGGAGGGAGTACGGATTATTATAAAAATATCAACCTTTTTTCAAACTTGAGTTTCCTATGTATGTTGGCACATTTTCACTCATGGTATGCTG
TGCATCATGAAATGGTTCTCAACAATTTGAACAATTGTAAAACACACATATGTGAAGAGAGAAGACAATAGTTATACAAGATTGGGTTCAGTTTCTTAAA
TACAAGAGATCGAGCTTCCATTTCTCCATGATCCTATCAGCTCCTACACCAAGCCCACGCAGATCGACACCACAAGCCCTCAATCCTCCGCTGCCCATCT
GCCAAAGCAAACAAGAACGCAAGATACATTAATCTTCCACCATTGATTGATTGAGCCACGGGTTTGAGCACATTAATTCAGATATGGACGCAGAGCTCAC
CTGAGTTGGGACTGACTAGCCAACCACGCACGCATGGCAGCTACTTAGTAGCCGATGTCGGCGTCGTCGACGACGAGCTCGACGTCGATGATGATCTCCC
GCATGGCGGGCTTCTTCTCGCCGCTGACGGCGATGAGGTAGCTGCGGCCGACCCACCCGATCCAGCCGGCGATGTAGAGGAAGAGCACGCCGGGGGTGAT
GAACTCGCCCCAGTGCCGCTGGTCGCCGCTGACGATGAGGTGGGGCAGGCCGTCGGAGCCGCAGAGCAGGCCGAACTTGCCGTAGTTCTCGAACCGGCGC
TTGGTCTTCTCGATGGTGGCCTGGATGGCGAGCGCGGGGGCCGAGTCGGGGGCGTACTTCTTGAGCGACGAGTTGAGCTTCTTCACCGACTGCTTCTCCC
GCTTGGCGAACGCCTTGGACTCCTTGCACGGGGTCAGGCCGGCGATGTCGGCGGCCGCCGGCGGCGGGGAGGTGGCGGCGGAGGAGAGGAGCACGGACGA
GAGCGCCAGCGCGGCCGAGAAGGTCTTGATGGAGGCGGTGAGGGCGGCCATTGCTGCGTCCGTGGCGCGCGCGGGCGAGCGTGTGGAGGGGTTTGATGTG
TGATCGATCAAGGGGTGAGGGGTGGGCGTGTAGTTTGTGTGGGTTTGTAAGTGGAGGGGATAAGGGGCGTGGCGCGAGTGGGTGAGGCGGAGATAAGAG