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Detailed information on CNT30300256


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641010Triticum aestivumNymphaea colorata2.8720.169050reverse complement
CNT30441022Triticum aestivumAegilops tauschii29.68100.7889.36517forward

Expression of CNT30300256

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSKLNTPSYVLFLLILPQIVKMDSFLLTHCTVL*

>peptide 2 (53 aa)
MPSNFGRSLFGFDQVTFVTSQQHLQVLSVLEDGRGRKIIFVELNFLYSVLLYV*

Sequence

>CNT30300256
GAAATGTTGCAAGCTTCGCATGTCATTGAGATTCTGGAAGATGATTTGGTTCACTTCACCCAGTGATTTCTTTGTCATAAACTGAGCATATGCGGTTTCT
TCAGGAACCCTCCTTATTGAAGTGTGCATCCATTCCATTGAGATGGCTATTCCAAGCAGCAAAGTTTTGTTAATGACAGTTCGTGTGCTTGCCCACTAAC
AATTTTGCATTTCTGCCCAATAACAGGTTCCACTTCTTGGTGGAGCGATGTGCATGTGCACCTGGCATTTCTTCTACAACTCAGTCTCTCGAGGTAACAT
ATTGACCTGAAGGCAAAGCTACACCACAGGACTGAACCATACCGTACGCCGGGCGTGGTCGTGCTACTAACCGCCAGGCCACCGACGCTGGCGCCGGTGC
CGACCCCGACCAGAGATCCGTCGCCGCCCAGGACCCCAAGCTACTGGACGACTTCGCAGACACCGAAGCCAACACCAAAGTTTAATTACCACCTCCAAAT
CAAATCCTGGGGCTTCATTCATGGCTGTCTAGTACTGCTAGTTAATCCTGGGGCTTATTTACCATCAGTTAGTACACTATCCAGTACTGCTAGTTCTCAT
CTCACTTGTTGTGCTTCTTGGACTGGGAGCACTCTTTGTTATCCAAGATCTAACATGAAAGGTAAAATGGGTACATCGCTTGTCTTGTTGTATTTGCAAG
TTTGAAACTGGATTAGCATCTTGGAGTATTGTTGTACTCCAACAGACTAAACAGTACGTACTCCAGTGCTGATAGTTAGAGTAGCATCTTGGAGTAGGGT
AGTCCACATTTGTCTAAATTAGACCGGATTATTCAGATTAGTCCACATTTTATATTATTCTTGGAGTACTGTACTGTAGCAGCAGCATGAGTAAACTGAA
TACTCCTTCATATGTTTTGTTCCTCCTTATTCTTCCTCAGATTGTGAAAATGGATTCATTCCTTCTTACGCACTGCACTGTACTGTAATATTGGTTGCTT
TTGATGAGTGCCAGAGAGCAATAATAGATCATTTTTCGAATTAATACTCCAAAATTTATCTGTATTGGAGGAGTGATTGTTTCCAAATCAATACTACTGG
GCATCATTCATGGCTGTCTAGTAGTCAACATACTTCTGGTTCCATTTAGTATATGCAGGTAGCAGCAGCTTAAGTGTAATGGACCTGTTGTTACTCTATG
CCTACGTTGTTAGAGTTTGCATCATCTCCTTGTTGTTTATAGCATAATTGCCTTCACTATTCTTGCTCTGAACCTTTGATCATGATACTGACTGTATTTG
TCTTGATGGAATTACAGGCAACATGGTGACTCTAGTGTAGGCAACACTGGCCATCCTCTTCGAGGCTGTGTGTTTAGGACGAGCTGCAGCGGGACAACTT
GGAGAGCAAGTACTTTGAGGACAAGATCAAGGAGAACCAAGAGAAGATCACCGGTTACCTCATACTTCTCGGCATGCCTAGCAACTTTGGCAGATCCCTC
TTTGGCTTCGACCAAGTTACATTTGTCACTAGCCAGCAGCATTTACAGGTGTTGTCAGTTCTGGAAGATGGAAGAGGAAGAAAAATAATTTTTGTTGAAC
TAAATTTTCTGTATTCTGTTTTGTTGTATGTATGATTTGATAGTTTTGTATAGGAACAAGTGATACTATTTTGTAGGGCTTTATGGCCTGTGTACTATTT
TGTAGGGCTTTATGGCCTGTGATGTAAACATATTTAGTGCTG