« Back to Triticum aestivum search


Detailed information on CNT30300194


BLAST search results

BLAST vs Swiss-Prot:
sp|A8Y9D1|RR7_LOLPR, E-value = 3e-98

BLAST vs NONCODE:
NONOSAT000698, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690671Triticum aestivumOryza sativa31.4235.8398.79661forward
CNT30678135Triticum aestivumSetaria viridis40.3589.6599.06849forward
CNT30617775Triticum aestivumSesamum indicum24.867987.57523forward
CNT3021516Triticum aestivumCitrullus lanatus41.1147.0494.34865forward
CNT30524944Triticum aestivumPhaseolus vulgaris30.4264.2691.72640forward
CNT30198866Triticum aestivumPisum sativum10.9870.8690.48231forward
CNT30488794Triticum aestivumOlea europaea6.7565.4497.18142forward
CNT30710142Triticum aestivumGlycine max8.3239.2492.57175forward
CNT30556129Triticum aestivumOryza glaberrima12.6960.5497.75267reverse complement
CNT3059312Triticum aestivumArabidopsis lyrata25.5297.9993.85537forward
CNT30136937Triticum aestivumLolium perenne27.5291.6196.72579forward
CNT3018230Triticum aestivumZea mays34.41100.1498.34724forward
CNT30230544Triticum aestivumAnanas comosus12.3653.6192.69260reverse complement
CNT30623007Triticum aestivumDaucus carota19.7289.0690.6415forward
CNT30351849Triticum aestivumEragrostis tef6.8436.1895.83144reverse complement
CNT30355468Triticum aestivumLactuca sativa16.4428.2996.82346forward
CNT30153781Triticum aestivumPrunus persica31.6159.5993.98665forward
CNT30416238Triticum aestivumPapaver somniferum23.3464.195.93491forward
CNT30150659Triticum aestivumBrachypodium distachyon10.594.4491.86221forward
CNT30100515Triticum aestivumOryza rufipogon11.8398.0391.16249reverse complement
CNT30578120Triticum aestivumOryza barthii21.2977.7898.44448forward
CNT30115844Triticum aestivumOryza nivara31.1375.298.63655forward
CNT30603929Triticum aestivumOryza punctata7.9842.1197.62168reverse complement
CNT30111895Triticum aestivumFicus carica4.232592.1389forward
CNT30726897Triticum aestivumLupinus angustifolius19.3987.1885.54408reverse complement
CNT3049028Triticum aestivumCucumis sativus8.3260.3491.43175forward

Expression of CNT30300194

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MKRFHKNSRRIENVVFILYMPDHELVTASNLRKVPIVSIFEMGYLRNPHE*

>peptide 2 (39 aa)
MISVFSFFSFLFVSRKISSDSPSIDSFPIEMYGSMCLHT*

>peptide 3 (37 aa)
MLTNRLRKIGSDFAVLFSAVPRRDMSVKEVQESVFFL*

>peptide 4 (31 aa)
MRYLTPGKSLTLPPLTNTTECSCKLWPIPGI*

>peptide 5 (29 aa)
MCKSSICLCHSMSRFLFAYGTPTPFGSIY*

>peptide 6 (72 aa)
MAPPLPLAASTNSELNLKAIFRPGRFWDASNNQRMASALPCLDPISIGTFRVDPFLLRLVFTPILGVTLHIA*

Sequence

>CNT30300194
GTAGGAACATAAACTGAAACATTCTGGAGCTACAAAGATAGTTATTAAATCGTTAGCACCACATAAAAACATTCCCCCTAGAGTAGCTGTTAATACGAAT
AACAGAAACTCTGTTATAGCCATTTCTGTACATTCAATGTACTCTACGGATAGAGGAATACATAAAGTTGAACATAATAAAATGAGAAATTGAAAGATTT
CGTTGAAATTGTTCGTTTGGAAATTTCCCGAAAAGCTAATTATAGGTTCTTCTCTCCATCGGAACAATAGGGCCGTTATGCTTATTACTAAACTTGTTGA
AGAGATGAAATAGAACCAAGGTCTATCTTTTTGATCAGAGGTTGAATCGATCATCAGAAGAAGAATTAGGCCAAAAATTAGGATACATTCTGGGAAAATG
AAACTTCCATTGAAGAGAAGCAAATGAAACGCTTTCATAAAAATTCTCGTAGAATCGAGAATGTAGTTTTCATTCTGTACATGCCAGATCATGAATTAGT
AACTGCATCCAATCTCCGAAAAGTCCCGATTGTTTCGATTTTTGAAATGGGATATTTACGGAATCCCCATGAATAGGATCAAACCTTATTCCATGCTATT
TCCATAAGATTCTTCTTTCTTATTCTTAAGCAAGCCCTCGAGAGGGCTTAGTTGATCATGATTTCTGTTTTCTCTTTCTTTTCCTTTTTGTTTGTTTCGA
GAAAGATATCGTCCGATTCTCCTTCTATTGATTCTTTTCCGATCGAGATGTACGGATCCATGTGTCTACATACATAGATTCTGTTCATGGATTAACGAAA
ATGTGCAAGAGCTCTATTTGCCTCTGCCATTCTATGAGTCGCTTCCTTTTTGCGTATGGCACCCCCACTCCCTTTGGCAGCATCTACTAATTCGGAACTT
AATTTGAAAGCCATATTTCGACCCGGACGCTTTTGGGATGCTTCTAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAGATCCTATTTCAATCGGAA
CTTTCCGCGTCGATCCTTTTTTATTACGTCTTGTTTTTACTCCTATATTGGGAGTTACTCTACATATTGCTTGACGTAAAACCAATAGTGGATTTGTTTC
TGTCTTTTGTTGAATCTTTTTCACGGCTCGATAGAGAATTTGATAAGCCAATGATTTTTTTCCGTCTTTCATAATACGGTTAACCACCATGTTAACTAAT
CGATTACGAAAAATTGGATCGGATTTTGCAGTTCTTTTTTCTGCAGTACCTCGACGTGACATGAGCGTGAAAGAGGTTCAAGAATCCGTTTTCTTTTTAT
AAGGGCTAAAATCACTTATTTTTTTGGCTTTTTGACCCCATATTGTAGGGTGGATCTCGAAAGATAGGAAAGATCTCCCTCCAAGCCGTACATACGACTT
TCATTGAATACGGCTTTCCACAGAATTCTATAGGGATCTATGAGATCGAGTATGGAATTCTGTTTACTCACTTTAAATTGAGTATCCGTTTCCCTCCTTT
TCCCGCTAGGATCGGAAATCCTGTATTTTCCATATCCATACGATCGAGTCCTTAGGTTTCCGAAATAGTGTAATGGAAAAAGAAGTGCTTCGAATCATTG
CTATTTGACTCGGACCTGTTCTGAAAAAGTCGAGGTATTTCGAATTGTTTGTTGACACGGACAAAGTAAGGGAAAACCTCTGAAAGAATTTCCATATTGA
CCTTGGACATATAAGAGTTCCGAATCGAATCTCTTTAGAAAGAGGATCTTTTGTCTCATGGTAGCCTGCTCCAGTCCCCTTACGAAACTTTCGTTATTGG
GTTAGCCATACACTTCACATGTTTCTAGCGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTG
ACGATTCTTTACTGCGACAGCATCTAGGGTTCCTCGAATAATGCGATATCTCACACCGGGTAAATCCTTAACCCTTCCTCCTCTTACTAATACTACAGAA
TGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTTCAAATCCAGAGGTTAATCGTACTCTGGCAACTTTACGTAAGGCACAGTTGGGTT
TTTT