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Detailed information on CNT30300142


BLAST search results

BLAST vs Swiss-Prot:
sp|P12112|ATPA_WHEAT, E-value = 1e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196774Triticum aestivumPisum sativum20.57.4286.15260forward
CNT30148014Triticum aestivumBrachypodium distachyon21.1495.0496.27268forward

Expression of CNT30300142

Peptides detected in this lncRNA

>peptide 1 (30 aa)
SFSTIPILLTRVDMQNLFVTEEKTVPAVPE*

Sequence

>CNT30300142
TCTTTCTCAACGATTCCTATTCTACTAACAAGAGTAGACATGCAAAATTTATTTGTTACTGAAGAGAAAACCGTTCCAGCTGTTCCTGAATAGCTTCCTT
CAAAAGGATTTCCGCTTGCTCGGTGAATGTCTTGCTAGAAGATATAATTTCTTTGAATTGAGGTTTAGTATCTTTTAGATGTTTACGTAACTCATCCAGA
AATTTATTTACCTGTTCAATTTCTAACGAATCAAGATATCCTCTTGTTCCGGTATAAATAGTAGCTATCTGCTCTTCCACTGGGAGAGGATTTGCCTGGG
ATTGTTTAAGCAATTCCCTTAATCGTCGACCCCTTGCCAATTGATTCTGACTTGTTTTATCGAGAGCAGAGGCGAATTGTGCAAAGGCTTGTAACTCTGC
GAATTGAGCTAGTTCCAATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTTGAGCCGCGGATCCTACTCTGGAAACAGAAATACCCACATTAATA
GCGGGTCGAATTCCGGCATTGAATAGATCCGCAGATAAGAATATTTCTCAACGATTCCTATTCTACTAACAAGAGTAGACATGCAAAATTTATTTGTTAC
TGAAGAGAAAACCGTTCCAGCTGTTCCTGAATAGCTTCCTTCAAAAGGATTTCCGCTTGCTCGGTGAATGTCTTGCTAGAAGATATAATTTCTTGGAATT
GAGGTTTAGTATCTTTTAGATGTTTACGTAACTCATCCAGAAATTTATTTACCTGTTCAATTTCTAACGAATCAAGATATCCTCTTGTTCCGGTATAAAT
AGTAGCTATCTGCTCTTCCACTGGGAGAGGATTTGCCTGGGATTGTTTAAGCAATTCCCTTAATCGTCGACCCCTTGCCAATTGATTCTGACTTGTTTTA
TCGAGAGCAGAGGCGAATTGTGCTAAGGCTTGTAACTCTGCGAATTGAGCTAGTTCCAATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTTGAG
CCGCGGATCCTACTCTGGAAACAGAAATACCCACATTAATAGCGGGTCGAATTCCGGCATTGAATAGATCCGCAGATAAGAATATTTGTCCATCTGTAAT
GGAGATTACATTAGTAGGAATATAGGCGGAAACGTCTCCAGATTGAGTCTCAACTATTGGTAAAGCGGTCATACTTCCTTCGCCTAAAAGAGAATTTAAT
TTAGCGGCTCTTTCTAAAAGGCGTGAATGCAAATAAAAAACATCCCCTGGATAAGCCTCACGGCCGGG