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Detailed information on CNT30299904


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000950, E-value = 1e-141

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30242955Triticum aestivumAvena sativa66.24100.3298.61936forward

Expression of CNT30299904

Peptides detected in this lncRNA

>peptide 1 (32 aa)
STLSKIMHWMDARALRRKDAFRGERPWGEIFL*

>peptide 2 (60 aa)
FDAIENHALDGCPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 3 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

Sequence

>CNT30299904
GTTCGACGCTATCGAAAATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTG
ATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTA
AAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTT
GTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCGTAGTGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGG
GCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCC
TGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGAGGGACCACCCTCTAAGCCTA
AGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACC
GTGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCA
CTCTAACGGTGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGT
TCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATAC
GGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCG
AGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGAT
TGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGGACCTTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGGATCTT
AGCACCCAATCAGTCTGTCTGTACTAAGGATGACGGCCTGTATTCGGAGTTTCCCTGGGGTTGGTAAAGCGAAATGGGGGCCACCCTAGCCCATTGAGTG
CTCTACCTCGGGC