Detailed information on CNT30299845


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30665165Triticum aestivumTriticum dicoccoides82.4589.3699.02714forward

Expression of CNT30299845

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICI

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 3 (63 aa)
MARHLLATTETEHQVEGGLLLDVVVSEGAAVLELLTSKDEALLVRWDALLVLDLRLHIVNGVR*

>peptide 4 (35 aa)
TSSILFTGKLRTKCTISINVCTSSILFTGKLLSSH*

>peptide 5 (42 aa)
MQLLRLNSKRRHKFRAHLFIHFTVHPNLLRSESSRTQPNIST*

Sequence

>CNT30299845
GCACATCTAGCATCTTGTTTACGGGGAAACTGAGAACAAAATGCACAATTTCCATTAACGTTTGCACATCTAGCATTTTGTTTACGGGGAAACTTCTCAG
CAGCCATTGAAGCCGAGGTATAAAATAAAACACCTAAAGCAGATCATGCAATTGCTTAGGCTTAACAGCAAAAGGAGGCACAAGTTCAGGGCTCACTTAT
TCATTCATTTCACAGTTCATCCAAATCTGCTGCGGTCAGAAAGTTCACGGACACAACCAAACATAAGTACATAACACTAGACCACAGCACGGTAGCAACA
AAGCACAAGACCAGACGAGGACACACTGACAATCCGATCGGAGGACACAGAAAGGCAACCGACTTGTGAGCCCACAGACATAAGCAGCTCCATGGCCAGG
CACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCA
GCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCAGATGACTCGACCTCGAGCGTGA
TGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAG
GGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATC
GTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC