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Detailed information on CNT30299761


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 2e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695265Triticum aestivumOryza sativa83.2946.7593.52324forward
CNT30630888Triticum aestivumVigna unguiculata24.6814.1884.3896forward
CNT30122581Triticum aestivumPhyscomitrium patens22.3712.3487.3687forward
CNT30395284Triticum aestivumTriticum turgidum10056.54100389forward
CNT3089114Triticum aestivumVigna radiata27.2511.0283.96106forward
CNT30665641Triticum aestivumTriticum dicoccoides10051.05100389forward
CNT30596768Triticum aestivumOryza meridionalis86.1242.7889.85335forward
CNT30356274Triticum aestivumLactuca sativa21.5912.8886.984forward
CNT30570681Triticum aestivumVitis vinifera24.426.9585.2695forward
CNT30579413Triticum aestivumEchinochloa crusgalli85.0935.6792.15331forward
CNT30174623Triticum aestivumVigna angularis24.6811.2786.4696forward

Expression of CNT30299761

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

Sequence

>CNT30299761
TCATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGA
CCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTG
GAGGTACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCGGTTGGGCCCCTCGCGCATGATGGCGGCG
CCGCCAGTGGGCATCTCGAAGACCTGCTCCTTGGGGGAGGTCCAGGTGATGACGTAGAACTCCTCGACCTGGGCCTTGCGGAGGAGGCC