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Detailed information on CNT30299711


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-77

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30665960Triticum aestivumTriticum dicoccoides89.789.3699.02714forward
CNT30722018Triticum aestivumTriticum spelta82.66100100658forward
CNT30592842Triticum aestivumEragrostis curvula57.7956.5892.39460forward

Expression of CNT30299711

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 2 (43 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICI

>peptide 3 (63 aa)
MARHLLATTETEHQVEGGLLLDVVVSEGAAVLELLTSKDEALLVRWDALLVLDLRLHIVNGVR*

>peptide 4 (42 aa)
MQLLRLNSKRRHKFRAHLFIHFTVHPNLLRSESSRTQPNIST*

Sequence

>CNT30299711
TAGCATTTTGTTTACGGGGAAACTTCTCAGCAGCCATTGAAGCCGAGGTATAAAATAAAACACCTAAAGCAGATCATGCAATTGCTTAGGCTTAACAGCA
AAAGGAGGCACAAGTTCAGGGCTCACTTATTCATTCATTTCACAGTTCATCCAAATCTGCTGCGGTCAGAAAGTTCACGGACACAACCAAACATAAGTAC
ATAACACTAGACCACAGCACGGTAGCAACAAAGCACAAGACCAGACGAGGACACACTGACAATCCGATCGGAGGACACAGAAAGGCAACCGACTTGTGAG
CCCACAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG
AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAA
TGGTGTCAGATGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGT
GGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTG
TCCTGGATCTTCGCCTTGACATTGTCAATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC