Detailed information on CNT30299493


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONPOPT000178, E-value = 2e-160

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712870Triticum aestivumGlycine max20.126.0595.38433forward
CNT30605266Triticum aestivumGossypium raimondii22.2422.8996.24479forward

Expression of CNT30299493

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

>peptide 2 (42 aa)
GRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 3 (32 aa)
MSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 4 (29 aa)
TLSEAKGHGERFFCDPWISDRETVSKLRG*

>peptide 5 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 6 (76 aa)
MSAKAVALPYTRIRFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPADTFRSTFTCKPKSSCRTPSFLISVLAF

Sequence

>CNT30299493
GGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCT
CTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAA
GGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCC
GTAGTGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGG
TTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAAT
GATGATCGCTTTTACGCGAGAAAGAGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAA
CCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGC
ATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAAC
CGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGG
GTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTAAGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCT
AGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTC
GAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGCCGTCATCCTTA
GTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAG
TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCT
CAGGGCTCGAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGAC
AAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTC
AATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGC
CTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTC
AACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAA
ACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAG
GCGAAGAAAAAGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTA
AACCGAAGTCGTCTTGCCGAACTCCTTCCTTTCTCATTTCAGTCCTCGCCTTTT