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Detailed information on CNT30299053


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 6e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670969Triticum aestivumSetaria viridis28.3689.0499.311016reverse complement
CNT30641383Triticum aestivumNymphaea colorata39.4645.2694.271414forward
CNT30550219Triticum aestivumIpomoea triloba39.3532.4797.451410forward
CNT30702366Triticum aestivumQuercus lobata27.810097.79996reverse complement
CNT30378673Triticum aestivumArabidopsis thaliana20.0957.7496.39720reverse complement
CNT30283003Triticum aestivumChenopodium quinoa25.0994.1497.33899reverse complement
CNT30632346Triticum aestivumVigna unguiculata38.1248.8497.141366forward
CNT30505560Triticum aestivumNicotiana attenuata38.8262.9196.761391reverse complement
CNT30185187Triticum aestivumSecale cereale88.0589.299.333155forward
CNT30394721Triticum aestivumTriticum turgidum88.0586.1399.333155forward
CNT30569655Triticum aestivumActinidia chinensis39.2439.4896.591406forward
CNT30147396Triticum aestivumMedicago truncatula38.5446.4297.031381forward
CNT30140161Triticum aestivumLolium perenne72.8476.6799.042610forward
CNT3017954Triticum aestivumZea mays44.1541.7597.791582forward
CNT30605068Triticum aestivumGossypium raimondii32.3275.7996.631158reverse complement
CNT30216563Triticum aestivumKalanchoe fedtschenkoi38.2635.2597.451371forward
CNT30655407Triticum aestivumRosa chinensis39.0541.8596.851399forward
CNT30628241Triticum aestivumDaucus carota36.5148.4498.321308reverse complement
CNT30688989Triticum aestivumTriticum urartu54.3498.9899.541947forward
CNT30721631Triticum aestivumTriticum spelta88.0590.8499.243155forward
CNT30346087Triticum aestivumEragrostis tef23.6782.0199.41848forward
CNT30429739Triticum aestivumPapaver somniferum36.3740.593.551303forward
CNT30571858Triticum aestivumVitis vinifera40.1641.5297.361439reverse complement
CNT3056076Triticum aestivumAmborella trichopoda32.7450.9692.581173forward
CNT3038324Triticum aestivumCucumis melo36.769.7297.031315reverse complement
CNT30557400Triticum aestivumPanicum hallii18.2847.7498.17655forward

Expression of CNT30299053

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MTTRRWAWKQPSLEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

>peptide 2 (54 aa)
HALDGCPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 3 (84 aa)
MSVKAVALPYTRIRFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

>peptide 4 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

>peptide 5 (32 aa)
MSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 6 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

Sequence

>CNT30299053
ATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCCGAT
CGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTACGCTCTTTGGACTTTTCAAACTTAGCAAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAAC
CGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAACAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGA
AAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCATAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAAC
ACAGGACTGATGACGGGGTGGGGCGCGCACAGCAAGCATAGTTAGAAAAGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGG
GCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCC
TGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTA
AGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAAC
AATCAGTCAAAGGAGCGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAG
GTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCC
TTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGTGAAAT
CTATTTCAGTAGAGCGTAAGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAA
TACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC
ACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCCTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCC
ATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCG
GGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAA
GGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCT
TTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGT
CGAGTCATCAAAGCCGTCAACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACC
AGCAAACGGAGGGCTAAAACCTGTAGTTTTGAAGCAAGGGATGAGCGTGAAAGCCGTTGCGCTTCCGTACACGCGCATACGTTTTCTTGCTGGGGCGGAC
ACGGATTTCTCTCTAAAGGCGAAGAAAAAGAAGTGGGCGAACACTCGGCCCAGTGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTGCTGACACCTTTC
GAAGCACTTTCACGTGTGAACCGAAGTCATCTTGCCGAACTCCTTCCTTTCTCATTTCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTT
TGATTAGAGTGGAGGTCACGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGT
TGAAACTTCCAGGAAAAAACTTTGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGG
CGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATAC
CAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCAGAAGGAG
AAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCA
CGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCC
GTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTT
TCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAATGG
AGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACTGACTGGTCGAACAGAGACGAAAGTC
GGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTTATCG
ACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTG
GGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAGCCCTAGTACGAGAGGACTGGGCTGGGTC
AACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGTGAAATCCTTCTCTATACAAGTT
CTCGTACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACCGCGAGGTGTGAAGCGATCTCGTACTAAACGAA