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Detailed information on CNT30298225


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YWQ1|HSP81_ORYSI, E-value = 3e-78

BLAST vs NONCODE:
NONSLYT002404, E-value = 9e-114

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517898Triticum aestivumJuglans regia20.5217.3585.99157forward
CNT30381504Triticum aestivumManihot esculenta52.1646.5683.96399forward
CNT30402788Triticum aestivumBeta vulgaris36.7322.3485.77281forward
CNT3094731Triticum aestivumSolanum tuberosum55.4228.2585.85424forward
CNT30187977Triticum aestivumSecale cereale36.638.7889.29280forward
CNT30224612Triticum aestivumHordeum vulgare36.7349.4789.32281forward
CNT30560521Triticum aestivumActinidia chinensis50.7253.9682.47388forward
CNT30250974Triticum aestivumAvena sativa13.8624.6592.45106forward
CNT30314068Triticum aestivumCamelina sativa61.0530.886.51467forward
CNT30721901Triticum aestivumTriticum spelta36.9955.4986.57283forward
CNT30477326Triticum aestivumArabidopsis halleri48.8942.3188.77374forward
CNT30362636Triticum aestivumSorghum bicolor38.1731.391.78292forward
CNT30481150Triticum aestivumChara braunii52.8128.5981.68404forward
CNT30704690Triticum aestivumPrunus avium61.0522.9887.15467forward
CNT3055965Triticum aestivumAmborella trichopoda30.226.5886.15231forward
CNT30323609Triticum aestivumAsparagus officinalis61.0528.0588.65467forward

Expression of CNT30298225

Peptides detected in this lncRNA

>peptide 1 (45 aa)
NNNELFHEYHKQLAALNVWPAKRQNRYSDHPTSTLKIKTTRRCRA*

>peptide 2 (54 aa)
MNIRRQADLALSRPPPSCSHQRRPPGAACRCRSQAPHRPRQCSGLISMVFLLDM*

>peptide 3 (92 aa)
MLESLKAWAFMILSMLAVHPYSPVTRQQGESTTRSETMTFSTLSPSTSLMTLHSPSNFSLSSSCFFFSSSLSSSFRPSLVAETSFLPSNSLS*

Sequence

>CNT30298225
CAACAATAACGAACTGTTCCACGAGTACCACAAACAGCTAGCCGCGCTTAATGTTTGGCCAGCCAAAAGACAAAACCGATACAGCGACCATCCAACGTCG
ACACTAAAGATAAAAACAACTAGGCGGTGCAGGGCATGAACATCCGACGACAGGCAGACTTGGCGCTTAGTCGACCTCCTCCATCTTGCTCTCACCAGCG
TCGTCCTCCAGGGGCGGCATGTCGGTGTCGTTCTCAGGCGCCTCATCGTCCTCGTCAATGCTCAGGGTTGATCTCCATGGTCTTCTTGCTTGACATGTAG
CCAGCCATGCTCGAGTCCCTCAAGGCCTGGGCCTTCATGATCCTCTCCATGTTGGCGGTCCACCCATACTCGCCAGTCACCAGACAGCAAGGGGAGTCCA
CAACACGGTCAGAGACGATGACCTTCTCCACCTTGTCGCCCAGCACCTCCTTGATGACCTTGCACAGCCCCTCGAACTTCTCCTTGAGCTCCTCCTGCTT
CTTCTTCTCGTCCTCGCTCTCATCGAGCTTCAGACCCTCCTTGGTGGCAGAGACAAGCTTCTTGCCCTCAAACTCCTTGAGCTGACCAATGGCATACTCA
TCAATGGCGTCAACCATGTAGATGACCTCATAGCCCTTCTTCTTCAGCTTCTCAAGGAAGGGAGAGTTCTCCACAGCCTTCTTGCTCTCACCGGTGATGT
AGTAGATCTCGTTCTGTCCCTCCTTCATCCTAGCTTCTGCTTGTTGACCAAGTTCCACTCATGAG