Detailed information on CNT30297959


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 1e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186648Triticum aestivumSecale cereale62.0653.0896.55319forward
CNT30393936Triticum aestivumTriticum turgidum10057.8299.61514forward
CNT30665498Triticum aestivumTriticum dicoccoides78.9958.9397.04406forward
CNT30684822Triticum aestivumTriticum urartu10062.9999.42514forward
CNT30100939Triticum aestivumOryza rufipogon58.9538.3590.76303forward
CNT30579447Triticum aestivumEchinochloa crusgalli58.1731.6191.3299forward

Expression of CNT30297959

Peptides detected in this lncRNA

>peptide 1 (68 aa)
DSSIHSLVHTLCLINLHCAQLARGPLARSIMVQINTQSTCSYTLIHDVQVHMHISSDGRTDGRTAKHI*

Sequence

>CNT30297959
CGATTCTTCCATCCATTCCCTCGTGCACACCTTGTGCTTAATTAATTTACATTGCGCGCAGCTAGCGAGAGGACCTCTCGCTCGCTCGATCATGGTACAA
ATAAACACACAAAGTACGTGCAGCTACACGTTGATCCACGACGTACAAGTACACATGCATATCTCGTCCGATGGACGGACGGACGGACGGACGGCTAAAC
ACATTTAGCTTCCGGGGGCGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACCGGGTCGGCGACGTGGTCGAAGAGGTTCTCAACTGGCCCCTTCCC
GGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCCAAGTGGGTCGAAGGCGCCGCCTGGGTAGATGATATCGAGGCCCTCGCCG
AGGGGCCCGCCACCAACACGGTAGCCCTCGATGAAGCCCATGAGCACCACCTGCACCGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGTTGGGGT
TGCCCAGGTAGTCG