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Detailed information on CNT30297892


BLAST search results

BLAST vs Swiss-Prot:
sp|Q20EU7|PSBD_OLTVI, E-value = 8e-66

BLAST vs NONCODE:
NONVVIT000784, E-value = 9e-112

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30175943Triticum aestivumVigna angularis85.6311.9689.73292forward

Expression of CNT30297892

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MKWVQRPIMKSLEEKDESKYRCYAKTRRKEPTRLPQWINKEYRNKN

Sequence

>CNT30297892
TTATTGGAAAAAAGCAACACCAAAGATTTGGGACCGAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGGAAG
GTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCTACGGTCGCTCCATGAATAGCGCATAGCAGAGCCGCACCTAATACTCCGGCAACTCCCATCA
TATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGA
TTGCCCCAATGGATAAATAAGGAATACAGAAACAAAAACAG