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Detailed information on CNT30297782


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 2e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT302119Triticum aestivumZea mays61.4450.0994.48290forward
CNT30358694Triticum aestivumLactuca sativa26.0627.6484.55123forward
CNT30113105Triticum aestivumFicus carica36.4421.584.88172forward

Expression of CNT30297782

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

Sequence

>CNT30297782
TCGTCATCAAATTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCAGCATTCAAACTCGACAATTAAAATTACAGGACGTCCATCAT
CATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGAC
CTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGG
AGGCACTGCTCCTTGCGGGCGAGCTTGAGGAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCGGTGGGCATCTCGAACACCTGCTCCTTGGGGGAGG
TCCAGGTGATGACGTAGAACTCCTCGACCTGGGCCTTGCGGAGCAGGCCGCCCGTGCTGCCGCCGAAGATCG