Detailed information on CNT30297575


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696959Triticum aestivumOryza sativa51.0851.388.98118forward
CNT30677027Triticum aestivumSetaria viridis50.6540.0786.32117forward
CNT307240Triticum aestivumZea mays48.4827.8683.93112forward
CNT30344884Triticum aestivumEragrostis tef50.6550.8785.47117forward
CNT30551757Triticum aestivumOryza brachyantha31.624.4194.5273forward

Expression of CNT30297575

Peptides detected in this lncRNA

>peptide 1 (75 aa)
RTTWRARRRCLRSRLLLEAIKEGDDLLCASSWCRCGVPGGAGEVEPGAEHLRRSERRHCLEPKVEREGACSAQQEG

>peptide 2 (75 aa)
VPLGELVVDAYARGFFLKRSKRETIFCAPAVGAAVAYLEEPAKLSRVPSIFVGASAAIASSPKLREKGRAQLSKKG

Sequence

>CNT30297575
CCGTACCACTTGGCGAGCTCGTCGTCGATGCCTACGCTCGAGGCTTCTTCTTGAAGCGATCAAAGAGGGAGACGATCTTCTGTGCGCCAGCAGTTGGTGC
CGCTGTGGCGTACCTGGAGGAGCCGGCGAAGTTGAGCCGGGTGCCGAGCATCTTCGTCGGAGCGAGCGCCGCCATTGCCTCGAGCCCAAAGTTGAGAGAG
AAGGGGCGTGCTCAGCTCAGCAAGAAGGGAG