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Detailed information on CNT30297329


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697228Triticum aestivumOryza sativa93.5668.7789.91218forward
CNT30676931Triticum aestivumSetaria viridis93.1346.1788.02217forward
CNT30524487Triticum aestivumSetaria italica64.3811.2487.33150forward
CNT30314796Triticum aestivumCorylus avellana57.5119.5183.58134forward
CNT30518741Triticum aestivumJuglans regia59.6628.0284.17139forward
CNT30273043Triticum aestivumChenopodium quinoa67.816.3384.18158forward
CNT30380779Triticum aestivumManihot esculenta33.4812.5287.1878forward
CNT30405165Triticum aestivumBeta vulgaris56.222583.21131forward
CNT30223861Triticum aestivumHordeum vulgare54.9422.5498.44128forward
CNT30586189Triticum aestivumMusa acuminata35.1911.4889.0282forward
CNT30541563Triticum aestivumBrassica napus50.6417.6983.05118forward
CNT30237267Triticum aestivumBrassica oleracea27.477.8989.0664forward
CNT30258087Triticum aestivumAvena sativa69.5334.6297.53162forward
CNT3075755Triticum aestivumBrassica juncea50.6417.3383.05118forward
CNT30263618Triticum aestivumBrassica rapa50.6416.7981.36118forward
CNT30139084Triticum aestivumLolium perenne58.3716.2387.5136forward
CNT306434Triticum aestivumZea mays57.9453.5787.41135forward
CNT30610790Triticum aestivumGossypium raimondii57.0843.4684.21133forward
CNT30216367Triticum aestivumKalanchoe fedtschenkoi28.3318.2390.9166forward
CNT3068263Triticum aestivumLeersia perrieri31.769.7290.5474forward
CNT30128108Triticum aestivumCorymbia citriodora33.9115.1187.3479forward
CNT30345068Triticum aestivumEragrostis tef65.6717.1190.2153forward
CNT30365623Triticum aestivumSorghum bicolor71.2414.8785.54166forward
CNT30597047Triticum aestivumOryza meridionalis72.5317.3991.72169forward
CNT30371242Triticum aestivumOryza glumipatula45.9216.3490.65107forward
CNT30570331Triticum aestivumVitis vinifera30.912.287.572forward
CNT30104026Triticum aestivumOryza rufipogon71.2418.889.76166forward
CNT30582073Triticum aestivumEchinochloa crusgalli57.081888.72133forward
CNT30117945Triticum aestivumOryza nivara76.3920.3291.01178forward
CNT30604735Triticum aestivumOryza punctata41.211.3989.5896forward
CNT30557055Triticum aestivumPanicum hallii87.9827.4486.34205forward
CNT30724556Triticum aestivumLupinus angustifolius27.476.4887.564forward

Expression of CNT30297329

Peptides detected in this lncRNA

>peptide 1 (76 aa)
AGDGRGDPSLEELEGVAGHFLGGGPVLALGTRGHHAWLQEDALKHDVVLGHVVEGPLDAVLTVEHDLRLHNRHQPIV

Sequence

>CNT30297329
GCCGGGGACGGAAGGGGGGATCCTTCTCTGGAGGAGCTTGAGGGTGTAGCTGGCCACTTCCTCGGGGGTGGCCCTGTCCTTGCACTCGGCACCAGGGGTC
ACCATGCTTGGCTTCAGGAGGATGCCCTCAAACATGACGTTGTTCTGGGCCATGTAGTAGAAGGTCCTCTCGATGCCGTGCTCACCGTCGAGCATGATCT
CAGGCTCCACAATCGGCACCAGCCCATTGTCCT