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Detailed information on CNT30297012


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRR5|TBA3_HORVU, E-value = 5e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30439881Triticum aestivumAegilops tauschii10071.0699.82545forward
CNT30721658Triticum aestivumTriticum spelta39.0851.33100213forward

Expression of CNT30297012

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MREKTSTTLVELEIMQTALWTLARSPPGTTLGGW*

>peptide 2 (48 aa)
MVRFVLMVATAALTSLGTTSPRYMRQQAMYLPWRGSHLAIMEDGSKALL

>peptide 3 (45 aa)
IIQATTPTKSPQGTIQILKQGNGVGKPDNMHIDQGAKQVQTYHRL*

Sequence

>CNT30297012
GGATCATCCAGGCGACGACACCAACCAAATCACCCCAAGGAACAATACAAATACTGAAACAGGGAAATGGTGTAGGCAAACCAGATAACATGCATATTGA
CCAAGGTGCGAAGCAGGTTCAAACATACCACAGGTTGTAAACCAAACACCACACAGCAAACATTCAAACAGACAGACAGCAGATAAAGCCACTCGGGCAG
ATCACACGAAGGAACGCTTGGCGTACATCAGGTCGAACTTGTGGTCAATGCGGGAGAAGACCTCGACAACGCTGGTGGAGTTGGAGATCATGCAGACAGC
CCTCTGGACCTTGGCAAGGTCACCGCCTGGGACGACGCTGGGTGGCTGGTAGTTGATACCACACTTGAAACCAGTGGGGCACCAGTCCACAAACTGGATG
GTGCGCTTCGTCTTGATGGTGGCCACAGCGGCGTTGACATCCTTGGGCACAACATCACCACGGTACATGAGACAGCAGGCCATGTACTTGCCGTGGCGGG
GGTCACACTTGGCCATCATGGAGGATGGCTCGAAGGCGCTGTTGG