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Detailed information on CNT30296689


BLAST search results

BLAST vs Swiss-Prot:
sp|P85087|GLNA_VITSX, E-value = 5e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691310Triticum aestivumOryza sativa14.0425.1791.8974forward
CNT30671311Triticum aestivumSetaria viridis26.945087.32142forward
CNT30223060Triticum aestivumHordeum vulgare44.5967.3482.98235forward
CNT30392802Triticum aestivumTriticum turgidum57.6941.76100304forward
CNT30250445Triticum aestivumAvena sativa44.442.8696.15234forward
CNT301731Triticum aestivumZea mays33.7830.7491.57178forward
CNT30683585Triticum aestivumTriticum urartu31.8826.4698.21168forward
CNT30351207Triticum aestivumEragrostis tef35.4828.6891.44187forward
CNT30364720Triticum aestivumSorghum bicolor39.2832.6585.99207forward

Expression of CNT30296689

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MCCACRLPSFSMAVLITSYPPASRIDLVL*

>peptide 2 (30 aa)
NRIITGSMISFIGMRKQHYFQSRLKTLTLI*

Sequence

>CNT30296689
AACAGAATCATAACCGGCTCCATGATTTCATTTATCGGAATGCGAAAACAACATTATTTTCAGAGTAGACTGAAGACTCTTACTCTTATCTGAACGAGTA
AAGTGAAAGACACCAAAGGCACGCCCCAAAAACAGACTAGACCTTGCAAAAGAAATGGAAACACGAAACGTTTTGCAGAAATTAATCAATCGCCACCCTC
GATCGAGAGAGTCGAGAGCCTGGGTGTCATGATCTGGCGGCGGTAGGCATGGCCGTGGGTGGGTGGCTCAGAGGAGGAGCGTGGTCTCGGCGATCATGGA
GGTGTTGATGTCGGCGGTCTCGTGGTGGCCCGTGAGGCGGCGCTCGTTGCCCTCGCCGTAGGCGGCGATGTGCTGCGCGTGCCGCTTGCCCAGCTTCTCG
ATGGCCGTCTTGATCACCTCGTACCCGCCGGCCTCCCGCATCGACTTGGTGCTGTAGTTGGTGTGCGCGCCCGCGCCGTTCCAGTCGCCCGGGATCGGCT
TCGGGTCCAGGGACAGCACCACCCCGG