Detailed information on CNT30296213


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4W8D0|GLN13_ORYSJ, E-value = 5e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549182Triticum aestivumIpomoea triloba25.6323.5990.1471forward
CNT30137282Triticum aestivumLolium perenne47.6530.7796.97132forward
CNT3040612Triticum aestivumMarchantia polymorpha39.3511.1292.66109forward

Expression of CNT30296213

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SNRIITGSMISFIGMRKQHYFQSRLKTLTLI*

Sequence

>CNT30296213
ATCGAACAGAATCATAACCGGCTCCATGATTTCATTTATCGGAATGCGAAAACAACATTATTTTCAGAGTAGACTGAAGACTCTTACTCTTATCTGAACG
AGTAAAGTGAAAGACACCAAAGGCATGGCCGTGGGTGGGTGGCTCAGAGGAGGAGCGTGGTCTCGGCGATCATGGAGGTGACGACGTAGGGGTCCATGTT
GGAGGCCGGCCTGCGGTCCTCGAAGTAGCCCTTGCCGTCCTTCTCGGTGTCGCGGCCCACGCGGACGGACGCGCCGC