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Detailed information on CNT30296041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692506Triticum aestivumOryza sativa41.4543.7589.68126forward
CNT30521685Triticum aestivumSetaria italica89.4788.3183.09272forward
CNT30664085Triticum aestivumTriticum dicoccoides101.9710095.48310forward

Expression of CNT30296041

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PSSVTRACHPCGGIEGGVDVWCELWTWPVL*

>peptide 2 (40 aa)
RAQSRELVTHVGASKVVWMFGANSGPGLCCNIDGLPGPSW*

>peptide 3 (46 aa)
AELSHESLSPMWGHRRWCGCLVRTLDLACVVTLMACPVQVGSGLGG*

Sequence

>CNT30296041
GCCGAGCTCAGTCACGAGAGCTTGTCACCCATGTGGGGGCATCGAAGGTGGTGTGGATGTTTGGTGCGAACTCTGGACCTGGCCTGTGTTGTAACATTGA
TGGCCTGCCCGGTCCAAGTTGGTAGTGGGCTGGGGGGCTGATGCGAAAGCTTTGGCCTCTCTGTCCCTGAAGTGGCAGGCACCGCGTTAGGCTGGATTCA
CAGAGCAGCGCTCACTGTCCTCTTCCAACAGTGGAAGGATAACAGGCCGCTGCACCATGGGCCCGCTCTGGTTCAGAGTTCTTCCACAACAGACCACCAT
CTTT