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Detailed information on CNT30295690


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690874Triticum aestivumOryza sativa24.1946.5685.21142forward
CNT30677251Triticum aestivumSetaria viridis28.9627.1191.18170forward
CNT30523711Triticum aestivumSetaria italica20.6129.9582.64121forward
CNT30640866Triticum aestivumNymphaea colorata20.9514.8483.74123forward
CNT30529038Triticum aestivumEucalyptus grandis20.9533.5186.18123forward
CNT30392240Triticum aestivumTriticum turgidum69.5151.1394.36408forward
CNT30462022Triticum aestivumSaccharum spontaneum29.9832.8491.48176forward
CNT30338280Triticum aestivumEragrostis tef27.4330.0486.96161forward
CNT30367417Triticum aestivumSorghum bicolor31.1865.5990.16183forward
CNT30371376Triticum aestivumOryza glumipatula30.8337.1788.4181forward
CNT30578155Triticum aestivumOryza barthii30.8316.4588.4181forward

Expression of CNT30295690

Peptides detected in this lncRNA

>peptide 1 (54 aa)
NFEKMGHKSFVRTCIIKWNYKYRAPVELKHTPTHDTHTDARGVRATARNSNPTY*

Sequence

>CNT30295690
AATTTTGAGAAGATGGGCCACAAAAGTTTCGTGAGGACTTGCATAATAAAGTGGAATTACAAATACAGGGCGCCGGTAGAATTGAAACACACACCGACAC
ACGACACACACACCGACGCAAGAGGTGTGAGAGCCACTGCAAGAAACAGCAACCCCACTTATTAAGCACGCGGAAGCTAGCACGCAGAGAAAATCACGCA
CAGGCGAGCACGAGACCAGGCCCACGTCCCAGCCTCTCTCACTTATGGAACGCACGTAACGTAGGCACACGCACGGCCGGCGGCGAGGCCGGCCACCGCA
CGTCGACGGCGACCTAGCCGAAGTGGTGGTGCTTCTTCTCGCCGCTGGCCTCCTTGGCCTCCTTGTGGTCCTGCTTCTTCTCGTGGTGCTCGTGGAAGAC
GAAGCCGCCGGCGCCGACGGCTGCGGCGGCAGCCACCTCCTCCTCGATCTTGTGCTTGTGCGCGTGCTCCGGGTCCTTCTTCGCCTCGTGCTTCTCGTGG
TGGTGCTTCTCCTCCGACATGGCTGGCTGATCGATTAGCTAGCTAGCACTTGTGTGTGTGTGTATGTGACAGTAGGACAGCTGCTTA