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Detailed information on CNT30295346


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703316Triticum aestivumQuercus lobata2522.891.4370forward
CNT30727469Triticum aestivumCorchorus capsularis27.525.3393.5177forward

Expression of CNT30295346

Peptides detected in this lncRNA

>peptide 1 (57 aa)
RAQLRELVTRVGALRYCSVAGLVWVCYCWPARSKLRSGPLGLMRKLGLTVHNVAGTA*

>peptide 2 (39 aa)
MWQAQREAGFTEQRQLPAFNGGRITGRCTPRPLGSRSLF*

Sequence

>CNT30295346
GCCGAGCTCAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTACGCTATTGTAGCGTTGCGGGCTTGGTCTGGGTGTGCTATTGCTGGCCCGCCCGTTC
CAAGTTGCGTAGTGGACCGCTGGGGCTTATGCGAAAGTTGGGCCTCACGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACA
ACTGCCCGCTTTCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTAGGCCGCTTGGGTCTCGCAGCCTATTCTAGTGAA