Detailed information on CNT30295245


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30662827Triticum aestivumTriticum dicoccoides18.236.697.9497forward
CNT30137084Triticum aestivumLolium perenne41.8475.0885.65223forward
CNT30683535Triticum aestivumTriticum urartu43.3437.68100231forward
CNT30362117Triticum aestivumSorghum bicolor9.5720.6594.1251forward
CNT30369796Triticum aestivumOryza glumipatula27.5831.7582.99147forward
CNT30585318Triticum aestivumEchinochloa crusgalli33.7716.0786.11180forward

Expression of CNT30295245

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MDWSVGGHLGEHALLVLGADDLDQLVVLLLLLCLRFIFDIGQPGGLPLLGALEVAHVRLLLLDLAQLALDDGGGGVDGGVG*

>peptide 2 (99 aa)
KLSVKTVVNKWHFPERKQNRWIGLSVVTLVSTLSSSSAPMTSTSSSSSSSSSASDSSSTSDSPEDCHSLVPLRWRTSVSFSLILRSLRLTTAAAASMEA*

Sequence

>CNT30295245
AAATTATCAGTCAAAACAGTTGTAAACAAGTGGCATTTTCCTGAACGCAAGCAAAATAGATGGATTGGTCTGTCGGTGGTCACCTTGGTGAGCACGCTCT
CCTCGTCCTCGGCGCCGATGACCTCGACCAGCTCGTCGTCCTCCTCCTCCTCCTCTGCCTCCGATTCATCTTCGACATCGGACAGCCCGGAGGACTGCCA
CTCCTTGGTGCCCTTGAGGTGGCGCACGTCCGTCTCCTTCTCCTTGATCTTGCGCAGCTTGCGCTTGACGACGGCGGCGGCGGCGTCGATGGAGGCGTAG
GATGACTCCTCCTCCTCCTCGGCGCGCACGACGCCGTGGCGCCTGGTGAAGAGCGTGACCTCGCAGCGGGAGAGCTTGGGGCCCTTGCTGAGGTCGCCGC
CGCGGGCGGAGAGGCGCGCCGAGGAGAGCGGCCCGTCCCAGGCCGCGCGCACGGAGATGGAGACGGAGGAGGGGCGGTCGGTGGCGGCGGCCAGGGTGAG
GGCGCGGCCGAGGAAGCCGGAGCGGAGGGCGCG