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Detailed information on CNT30294498


BLAST search results

BLAST vs Swiss-Prot:
sp|A6XMY9|METK1_TRIMO, E-value = 4e-176

BLAST vs NONCODE:
NONPOPT000587, E-value = 1e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Triticum aestivumSetaria viridis54.3254.6688.25434forward
CNT30520816Triticum aestivumSetaria italica54.3250.2388.02434forward
CNT30549537Triticum aestivumIpomoea triloba43.5552.2582.47348forward
CNT30515028Triticum aestivumJuglans regia22.7821.4485.16182forward
CNT30698521Triticum aestivumQuercus lobata33.6747.9582.9269forward
CNT30373104Triticum aestivumArabidopsis thaliana50.8148.3980.79406forward
CNT30618114Triticum aestivumSesamum indicum26.9147.5781.86215forward
CNT30266729Triticum aestivumChenopodium quinoa41.6825.8385.89333forward
CNT3021108Triticum aestivumCitrullus lanatus39.9219.3886.52319forward
CNT30729630Triticum aestivumCorchorus capsularis51.3150.0682.2410forward
CNT30381460Triticum aestivumManihot esculenta51.8145.0582.13414forward
CNT30402638Triticum aestivumBeta vulgaris44.5627.7985.96356forward
CNT30524850Triticum aestivumPhaseolus vulgaris27.1630.0683.87217forward
CNT30628391Triticum aestivumVigna unguiculata55.1938.4580.5441forward
CNT30194995Triticum aestivumPisum sativum25.6621.5383.9205forward
CNT30495282Triticum aestivumOlea europaea27.2812.3883.94218forward
CNT30712013Triticum aestivumGlycine max28.9151.6882.68231forward
CNT3047442Triticum aestivumPrunus dulcis26.5334.9885.38212forward
CNT3090332Triticum aestivumSolanum tuberosum33.2940.9284.21266forward
CNT30181754Triticum aestivumSecale cereale41.853.197.9334forward
CNT30389985Triticum aestivumTriticum turgidum51.8140.7199.76414forward
CNT30561874Triticum aestivumActinidia chinensis52.3247.3983.73418forward
CNT30508429Triticum aestivumSolanum lycopersicum16.0251.8285.94128forward
CNT30172560Triticum aestivumTrifolium pratense22.0325.8485.23176forward
CNT30437887Triticum aestivumAegilops tauschii47.9354.71100383forward
CNT30662024Triticum aestivumTriticum dicoccoides32.4250.98100259forward
CNT3082721Triticum aestivumBrassica juncea21.7860.2184.48174forward
CNT30471290Triticum aestivumSaccharum spontaneum54.3248.3388.02434forward
CNT30608385Triticum aestivumGossypium raimondii44.5664.7383.71356forward
CNT30218287Triticum aestivumKalanchoe fedtschenkoi37.858.1983.11302forward
CNT30650534Triticum aestivumRosa chinensis44.1837.8884.99353forward
CNT30212612Triticum aestivumHelianthus annuus25.0382.9981200forward
CNT30681758Triticum aestivumTriticum urartu85.3610099.41682forward
CNT30349162Triticum aestivumEragrostis tef38.834.0386.77310forward
CNT30477100Triticum aestivumArabidopsis halleri17.7735.9584.51142forward
CNT30368062Triticum aestivumSorghum bicolor47.5634.5887.63380forward
CNT30620815Triticum aestivumCajanus cajan21.6523.6784.39173forward
CNT30420528Triticum aestivumPapaver somniferum24.2810.1884.02194forward
CNT30571189Triticum aestivumVitis vinifera39.350.9784.08314forward
CNT3055182Triticum aestivumAmborella trichopoda52.1939.4580.34417forward
CNT3025891Triticum aestivumPopulus trichocarpa47.9349.1784.33383forward
CNT3035650Triticum aestivumCucumis melo39.9223.6684.95319forward
CNT30331991Triticum aestivumDioscorea rotundata25.5343.1382.35204forward
CNT30174554Triticum aestivumVigna angularis40.6845.2680.92325forward
CNT30113343Triticum aestivumFicus carica21.949.4486.86175forward
CNT30725315Triticum aestivumLupinus angustifolius53.1942.2585.18425forward

Expression of CNT30294498

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MTKRPDGFKWNMVFSSRYFSGITGLMTCSLRYSTVTWVLPSGLSQAQVPFLRTSVRRAPSLVASTWLRGMSSGVSSVA*

>peptide 2 (35 aa)
PPFFKSRLMLIIPGLKSKFSFTILRISLSGILPVP*

>peptide 3 (82 aa)
MAEGHELRGLIGGIAKHDTLVTSTNILRALGEMSVHTLGNVRRLLLYVDKHLAPVRIKANIIRDEANVAAGVTHNLLIVNRGL

>peptide 4 (42 aa)
ATLLQVKVDADHPRPEVKVLLHNLEDLLIGDLASTIRVNEDR*

>peptide 5 (61 aa)
MIPWSPAPISSGRLVKCPCTPWAMSGDCCSMLTSTLHRSASRPTSSEMKPMLRQVSRTIFS*

Sequence

>CNT30294498
GCCACCCTTCTTCAAGTCAAGGTTGATGCTGATCATCCCAGGCCTGAAGTCAAAGTTCTCCTTCACAATCTTGAGGATCTCCTTATCGGGGATCTTGCCA
GTACCATAAGAGTCAACGAAGACAGATAAGGGCTCAGGCACACCAATGGCGTAGGAGATCTGAACAATGCAGCGGCGTGCAAGACCGCTAGCAATGATGC
TCTTGGCAGCCTGCCTGGCAATGTAGGCGCCACTGCGGTCAACCTTAGTTGGGTCCTTGCCAGAGAAAGCACCACCTCCGTGTGCTCCCCAGCCACCATA
GGTGTCGATGATGATCTTGCGACCAGTAAGACCAGCATCACCATGAGGGCCACCAATGACAAAGCGGCCTGATGGATTCAAGTGGAATATGGTCTTCTCG
TCCAGGTACTTCTCAGGGATCACCGGCTTGATGACATGCTCCTTGAGGTATTCAACCGTGACCTGGGTTTTGCCATCAGGCCTTAGCCAGGCACAAGTGC
CATTCTTGCGGACTTCAGTGAGGCGGGCACCCAGCTTGGTGGCAAGCACATGGCTGAGGGGCATGAGCTCAGGGGTCTCATCGGTGGCATAGCCAAACAT
GATACCCTGGTCACCAGCACCAATATCCTCAGGGCGCTTGGTGAAATGTCCGTGCACACCCTGGGCAATGTCAGGAGACTGCTGCTCTATGTTGACAAGC
ACCTTGCACCGGTCCGCATCAAGGCCAACATCATCAGAGATGAAGCCAATGTTGCGGCAGGTGTCACGCACAATCTTCTCATAGTCAACCGTGGCCTTG