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Detailed information on CNT30294297


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H50|RK16_WHEAT, E-value = 5e-93

BLAST vs NONCODE:
NONCSAT000320, E-value = 1e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641762Triticum aestivumNymphaea colorata69.0310.0888.57350forward
CNT30311863Triticum aestivumCamelina sativa49.915.4987.75253forward
CNT3083474Triticum aestivumBrassica juncea65.299.9185.5331forward

Expression of CNT30294297

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MIYQFSLNLIERGIISSFAGISGKKSLVIFYS

>peptide 2 (56 aa)
NKLTSYGHFTGSYGDSCSSYSFRYSPHFIKYTTRFNNGYPIFGGPLSRAHTCFRGS*

Sequence

>CNT30294297
AATAAATTGACTTCGTATGGGCATTTTACTGGCAGCTATGGAGATAGCTGCTCTAGCTACAGTTTCAGATACTCCCCCCATTTCATAAAGTATACGACCA
GGTTTAACAACGGATACCCAATATTCGGGGGACCCCTTTCCCGAGCCCATACGTGTTTCCGTGGGTCTTAGTGTAACCGGTTTGTCGGGAAATATACGTA
CCCATATTTTTCCACCACGACGTGCATATCGTGTTATTGCTCTTCGTCCTGCTTCTATCTGTCTCGCCGTGATCCAAGCGGGTTCAAGTGCTTGAAGAGC
ATATCTACCAAAACAAATACGATTGCCTCGGCAGGATTTTCCTTTCATTCTTCCTCTATGTTGTTTGCGAAATCTGGTTCTTTTGGGGTTATACATAGCA
ATTATATTAAATGATTTATCAATTTTCATTAAATCTTATAGAAAGAGGTATAATTTCTTCTTTTGCAGGGATTTCAGGAAAAAAGTCTCTTGTCATTTTT
TATTCTA