Detailed information on CNT30294268


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT002726, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30223648Triticum aestivumHordeum vulgare75.1395.7995.872275forward
CNT30499372Triticum aestivumDigitaria exilis61.3954.6998.281859forward
CNT30603680Triticum aestivumOryza punctata67.3451.6698.382039forward

Expression of CNT30294268

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MMSMARGRALNGLGWPPFRFTNPMETPNTGRHP*

>peptide 2 (61 aa)
MFDAIENHALDGCPGIEKEGRFQRRKAMGRDFSVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 3 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESSFFKCQ*

>peptide 4 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 5 (33 aa)
MMENQQAASVVRKVAVARPTELYKVSNRFGAQA*

>peptide 6 (84 aa)
MSAKAVALPYTRIRFLAGADTDFSLKAKKKKWANTRPSGRTCRLRLRAPSDTFQSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

Sequence

>CNT30294268
GGATAACCCAGATCACTCGGACTAGCTGAACTCTCCAGAACAAACACAACCTAGGTGGTTTGACTAACGTTTTGGCACATTAGACTAACCTAAGACAACT
CCTGGCTACATTCAGTCCTATCGAGATACAAGCTGTTACCAACCTGATACAACGCAAGTCACAAGCTTGACACAGCGAGAATGGCTGCAACTGACAACTC
CTGCATCTGAGATTGACAACTCTAGTAACAGAGAATGACAACTCCTGCAACAGATATTGACAGAGCATGACACTCTCAACTGAGCTCAATCCAGCTGTGA
ACAATAAACAACACTGAAAGTAAACAACACGGTTATCACAAAACTTGGATTCCGGATTACAACACTATAGGCAATGAACCACCACTAACGGCCCATAACG
TTAGCTGATAGCCGCTGACCGTGGAGTACTTGCCGATCCATCAGCGAGGACTGTATCATTTAGCGAGCTAAAAACTTAAGGAACATGTATGTGAGAGTTC
CACTTTAGCTCCCTCAACACCAGGCGGGACGAGCAGCCCTATACCACGTGTAGCCACACTCTAGTGTCCTTTTCTACTTAGTTGGACAGATCACTTCAGA
AAATCGTATAAAAATCAAGCAAGAAAACGGATGCGCTAACGCGCAACGGCTTTCGCGCTAGTTGCTCAAAAAATCGTATAAAAATCAAGCAAGAAAACGG
ATGCGCTAACGCGCAACAGCTTTCGCGCTAGTTGCTCAATCCGTTGCTTGCTTCTCTTCTGTCTTGGAAAAGTGAGGATTTCCTATCTGATCCAAGGGAA
GGAAGAGAGGTGGAAAGTGTTGCTGTGTCAAATCGAGATTGTGTGGGTGTCCGCTCATGTTCGACGCTATCGAAAATCATGCATTGGATGGATGCCCGGG
CATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGATTTTTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTG
GCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGC
GAGAGCGGAACAAGGGTTTTAATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAACCAGCAAGCAGCAAGCGTAGTT
AGAAAAGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGC
GCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCCGAGTAAAACGCG
GCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAA
AGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCACTCTAACGG
CGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTAT
TTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAAGAGGCCTTGGAGGACCGAACCCACGTATGTGGAAAAATACGGGGATGAC
TTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGC
ACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCATGGAAACTCCGAATACAGGCCGTCATCCTTAGTACAGACAGACTGATTGGGTGCTA
AGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGGAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGG
TGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCTCAGGGCTCAAGTGATTCACCGAAGC
GACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAG
AATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGGCTGCCAGTGGAAGGCTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCC
TAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGCCTGGATCGTCGGAGCGAATTGGATG
ATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTCAACTAATTCAAAGGGGCTCGGCTGG
CCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACGGAGGGCTAAAACCTGTAGTTTTGAAGCAAGGGATG
AGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAGGCGAAGAAAAAGAAGTGGGCGAACA
CTCGGCCCAGCGGGCGAACATGCCGGCTCCGGCTCCGCGCACCTTCTGACACCTTTCAAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCGAACTCC
TTCCTTTCTCATTTCAGTCCTCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTGGAGGTCGCGAGAGAGCAGAGCGTACCGCCCTG
CCATAGTCGCGAGGATCTTAATAGTCGG