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Detailed information on CNT30293877


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3057109Triticum aestivumAmborella trichopoda20.913.0885.5169forward

Expression of CNT30293877

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MSKCIGRGAFRLRGKQPRKRGSTKRNAPLPMHFDIPQLRQIA*

>peptide 2 (82 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSGTLPYRCILTSHSFGRSLSPVSQIFLLAILTLEVARFVIKSRITNS*

Sequence

>CNT30293877
CGGATTTGATCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTCAAAATGCATCGGTAGGGGAGCGTTCCGCCT
TAGAGGGAAGCAACCGCGAAAGCGGGGGTCGACGAAGCGGAACGCTCCCCTACCGATGCATTTTGACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGT
TTCCCAAATTTTCCTTTTAGCAATCCTTACATTAGAAGTGGCGCGTTTCGTGATTAAATCGCGAATTACAAATAGCTGAAAAAGCTTTATTGCTATCTCT
AGAGGTAATCCACATTGATGTAATGAAAGC