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Detailed information on CNT30293847


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673415Triticum aestivumSetaria viridis12.172110042forward
CNT30149122Triticum aestivumBrachypodium distachyon27.5418.8189.4795forward

Expression of CNT30293847

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MMDLAAAAGAAAAGAALALGGAAAAVSSAARHLRGWVGASEMERL*

>peptide 2 (66 aa)
MMHARHGACMIDDGSSSCSRSSRSWCRTCTGRCRSRSFLRSKTSSRLGWSFGDGEALNGYELRVCFL

Sequence

>CNT30293847
AACCACGGGAGATTTTATTTAGGGGGGGGCCTGTTTACAATCATGGCATGGCACCTGACTGCTGATGCAGGTCAGGTGCGTACATAAAGGCCCTCGATCA
GGTTGCGGTTACATGGTATGGTAGTAGTAGATCGATATGATCGATGATGCACGCACGGCACGGTGCATGCATGATCGATGATGGATCTAGCAGCTGCAGC
AGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGCGGTGCCGCAGCCGCAGTTTCCTCCGCAGCAAGACATCTTCGAGGTTGGGTTGGAGCTTCGGAG
ATGGAGAGGCTTTGAATGGCTATGAGCTTCGTGTGTGCTTCTTGC