« Back to Triticum aestivum search


Detailed information on CNT30293056


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3014272Triticum aestivumZea mays26.121.184.4277forward
CNT30681876Triticum aestivumTriticum urartu31.869.6396.8194forward
CNT30369272Triticum aestivumOryza glumipatula21.369.9790.4863forward

Expression of CNT30293056

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRQDRKHKPEHSTRGDITRTHTRTGTHRGAHTSAYFATNEHSKRMGLRAAVY*

Sequence

>CNT30293056
TGAGAAAATATTGAAGCTGAGATAATATCTAGGCACAATTTATTATTAAACCAGAGCATAGGAACGCTCATTTCAGTAAAAGATGAGACAGGATCGCAAG
CACAAGCCTGAACATTCAACACGAGGAGACATCACAAGAACACACACTCGTACAGGCACACATCGGGGGGCACACACCTCGGCTTATTTCGCGACGAACG
AGCACTCGAAGAGAATGGGGCTCAGAGCGGCAGTGTACTGATGGGCCTCCACCTCGAGCCACACATCCACCATTGCTGACTCCTTGATGTCGCCC